RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 GPN3Q9UHW5 284 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 ARHGEF40Q8TER5 1519 aa9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 ROCK2O75116 1388 aaKnown RBP9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 KANK1Q14678 1352 aa9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 CAMSAP1Q5T5Y3 1602 aa9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 PAGE1O75459 146 aa9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 VAMP1P23763 118 aa9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 MEI1Q5TIA1 1274 aa9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 EXOC6Q8TAG9 804 aa9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 UBL7Q96S82 380 aaPredicted RBP9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 PNNQ9H307 717 aaKnown RBP9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 PTPRTO14522 1441 aa9.79□□□□□ -0.84
UBE2D3-204ENST00000349311 CFAP65Q6ZU64 1925 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 FBXO24O75426 580 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 TIAF1O95411 115 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 ARNTP27540 789 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 TAF1CQ15572 869 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 RASIP1Q5U651 963 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 RUSC1Q9BVN2 902 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 KRT82Q9NSB4 513 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 IFT172Q9UG01 1749 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 PLA2R1Q13018 1463 aa9.78□□□□□ -0.84
UBE2D3-204ENST00000349311 LRPPRCP42704 1394 aaKnown RBP9.77□□□□□ -0.84
UBE2D3-204ENST00000349311 UHRF1BP1Q6BDS2 1440 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 SPATA31E1Q6ZUB1 1445 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 CELA3AP09093 270 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 GSTP1P09211 210 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 SCARA3Q6AZY7 606 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 GPAT2Q6NUI2 795 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 SULF2Q8IWU5 870 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 FAM46AQ96IP4 442 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 NOC4LQ9BVI4 516 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 TPSG1Q9NRR2 321 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 RCAN3Q9UKA8 241 aa9.77□□□□□ -0.85
UBE2D3-204ENST00000349311 BRD4O60885 1362 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 ANKRD34AQ69YU3 496 aa9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 CORO1BQ9BR76 489 aa9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 RRAGDQ9NQL2 400 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 TTF2Q9UNY4 1162 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 PCDHGC5Q9Y5F6 944 aa9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 CENPJQ9HC77 1338 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 ABCC3O15438 1527 aa9.76□□□□□ -0.85
UBE2D3-204ENST00000349311 LAMC1P11047 1609 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 CCDC144AA2RUR9 1427 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 ZNF862O60290 1169 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 NKAPLQ5M9Q1 402 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 ARMC10Q8N2F6 343 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 EMILIN2Q9BXX0 1053 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 GSX1Q9H4S2 264 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 CCDC86Q9H6F5 360 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 VTI1BQ9UEU0 232 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 KIAA1210Q9ULL0 1709 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 INSRP06213 1382 aa9.75□□□□□ -0.85
UBE2D3-204ENST00000349311 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 ARHGAP31Q2M1Z3 1444 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 UNCXA6NJT0 531 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 FRAT2O75474 233 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 TPM2P07951 284 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 UVSSAQ2YD98 709 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 PNISRQ8TF01 805 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 WDR18Q9BV38 432 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 CEP41Q9BYV8 373 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 TRPM1Q7Z4N2 1603 aa9.74□□□□□ -0.85
UBE2D3-204ENST00000349311 YEATS2Q9ULM3 1422 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 KIF3BO15066 747 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 RAPGEF3O95398 923 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 RPS26P62854 115 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 HP1BP3Q5SSJ5 553 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 PCNX4Q63HM2 1172 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 WDR89Q96FK6 387 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 CYP4F12Q9HCS2 524 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 CYP8B1Q9UNU6 501 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 PREX1Q8TCU6 1659 aa9.73□□□□□ -0.85
UBE2D3-204ENST00000349311 MROH2AA6NES4 1674 aa9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 AOC2O75106 756 aa9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 PREPP48147 710 aa9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 BECN1Q14457 450 aa9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 RSPO4Q2I0M5 234 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 NUTM2GQ5VZR2 741 aa9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 CENPQQ7L2Z9 268 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 GRIN3AQ8TCU5 1115 aa9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 RALGAPBQ86X10 1494 aa9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 COL17A1Q9UMD9 1497 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-204ENST00000349311 PPLO60437 1756 aa9.71□□□□□ -0.85
UBE2D3-204ENST00000349311 TRIM37O94972 964 aa9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 H2AFB1P0C5Y9 115 aa9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 H2AFB2P0C5Z0 115 aa9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 GLB1P16278 677 aa9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 SOX4Q06945 474 aaPredicted RBP9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 DOC2BQ14184 412 aa9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 CCDC85BQ15834 202 aaPredicted RBP9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 MPRIPQ6WCQ1 1025 aa9.71□□□□□ -0.86
UBE2D3-204ENST00000349311 AGMOQ6ZNB7 445 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms