RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 IWS1Q96ST2 819 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 NACA2Q9H009 215 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 POLR3GO15318 223 aaPredicted RBP17.25■□□□□ 0.35
PTPRO-202ENST00000348962 EXOC3O60645 756 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 ERICH4A6NGS2 130 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 BCAMP50895 628 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 TUBB4BP68371 445 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 ICA1Q05084 483 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 SPOUT1Q5T280 376 aaKnown RBP17.25■□□□□ 0.35
PTPRO-202ENST00000348962 GADL1Q6ZQY3 521 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 USP44Q9H0E7 712 aa17.25■□□□□ 0.35
PTPRO-202ENST00000348962 MTRF1LQ9UGC7 380 aaKnown RBP17.25■□□□□ 0.35
PTPRO-202ENST00000348962 SMCO2A6NFE2 343 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 PDE6AP16499 860 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 BTDP43251 543 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 CALCOCO2Q13137 446 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 SEL1L2Q5TEA6 688 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 PHKBQ93100 1093 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 ARHGEF16Q5VV41 709 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 ZNF654Q8IZM8 581 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 FAM107BQ9H098 131 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 KIF24Q5T7B8 1368 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 PPEF1O14829 653 aaPredicted RBP17.24■□□□□ 0.35
PTPRO-202ENST00000348962 BMS1Q14692 1282 aaKnown RBP17.24■□□□□ 0.35
PTPRO-202ENST00000348962 INF2Q27J81 1249 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
PTPRO-202ENST00000348962 SEMA3EO15041 775 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 POLR2DO15514 142 aaKnown RBP17.24■□□□□ 0.35
PTPRO-202ENST00000348962 SPOPO43791 374 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 CCDC63Q8NA47 563 aa17.24■□□□□ 0.35
PTPRO-202ENST00000348962 TRIM14Q14142 442 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 CCDC17Q96LX7 622 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 E7EWF7 191 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 CCNA1P78396 465 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 MIER3Q7Z3K6 550 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 TSGA10Q9BZW7 698 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 CTNND2Q9UQB3 1225 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 ZBTB1Q9Y2K1 713 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 PPP1R7Q15435 360 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 SUPT20HL1Q3ZLR7 823 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 PRIMPOLQ96LW4 560 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 EFCAB6Q5THR3 1501 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 PDE8BO95263 885 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 TNNC1P63316 161 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 ARFGAP3Q9NP61 516 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 AGTPBP1Q9UPW5 1226 aa17.23■□□□□ 0.35
PTPRO-202ENST00000348962 CNGA1P29973 690 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 MLKLQ8NB16 471 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 DEPTORQ8TB45 409 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 PPP1R9BQ96SB3 815 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTPRO-202ENST00000348962 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 DAPK3O43293 454 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 POLR2MP0CAP2 368 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 KRT9P35527 623 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 CC2D2BQ6DHV5 1058 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 CABP7Q86V35 215 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 FLOT1O75955 427 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 CD19P15391 556 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 PSTPIP2Q9H939 334 aa17.22■□□□□ 0.35
PTPRO-202ENST00000348962 AKR1B15C9JRZ8 316 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-202ENST00000348962 ZSCAN10Q96SZ4 725 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-202ENST00000348962 NAP1L3Q99457 506 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-202ENST00000348962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
PTPRO-202ENST00000348962 PAK1Q13153 545 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 TPH2Q8IWU9 490 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 PNMA1Q8ND90 353 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 PAIP2Q9BPZ3 127 aaKnown RBP17.21■□□□□ 0.35
PTPRO-202ENST00000348962 FAM204AQ9H8W3 233 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 MRPL44Q9H9J2 332 aaKnown RBP17.21■□□□□ 0.35
PTPRO-202ENST00000348962 MAGI2Q86UL8 1455 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 ZBTB24O43167 697 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-202ENST00000348962 GCNT3O95395 438 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 KRT19P08727 400 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 P4HA1P13674 534 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 TTC14Q96N46 770 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 TM6SF1Q9BZW5 370 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 NSRP1Q9H0G5 558 aaKnown RBP17.21■□□□□ 0.35
PTPRO-202ENST00000348962 TRPC6Q9Y210 931 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 NR1I2O75469 434 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 PCP11498 1178 aaKnown RBP17.21■□□□□ 0.35
PTPRO-202ENST00000348962 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 VPS54Q9P1Q0 977 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 DYMQ7RTS9 669 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 ZBTB8OSQ8IWT0 167 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 CEP63Q96MT8 703 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 METP08581 1390 aa17.21■□□□□ 0.35
PTPRO-202ENST00000348962 NLRP1Q9C000 1473 aa17.21■□□□□ 0.34
PTPRO-202ENST00000348962 KDM3AQ9Y4C1 1321 aa17.21■□□□□ 0.34
PTPRO-202ENST00000348962 ABCB5Q2M3G0 1257 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 CCDC122Q5T0U0 273 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 NCAPG2Q86XI2 1143 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 CCDC114Q96M63 670 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms