RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 IFT74Q96LB3 600 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 IFT81Q8WYA0 676 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 CCDC77Q9BR77 488 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 CARD10Q9BWT7 1032 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 IQCGQ9H095 443 aaKnown RBP20.81■□□□□ 0.92
UBE3C-201ENST00000348165 NFE2L3Q9Y4A8 694 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 SAMD9Q5K651 1589 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 STAMBPO95630 424 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 PAK1Q13153 545 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 SMCO2A6NFE2 343 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 IVLP07476 585 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 SPECC1LQ69YQ0 1117 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 MLKLQ8NB16 471 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.81■□□□□ 0.923e-7■■■□□ 16.4
UBE3C-201ENST00000348165 FAM135BQ49AJ0 1406 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 ATP2C2O75185 946 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 MSANTD4Q8NCY6 345 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 ZFP91Q96JP5 570 aaPredicted RBP20.8■□□□□ 0.92
UBE3C-201ENST00000348165 SYNRGQ9UMZ2 1314 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 CBX8Q9HC52 389 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 RNF123Q5XPI4 1314 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 PDE8BO95263 885 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 NELFCDQ8IXH7 590 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 DDX12PQ92771 950 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 ATP2A1O14983 1001 aa20.8■□□□□ 0.92
UBE3C-201ENST00000348165 ADORA1P30542 326 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 MYSM1Q5VVJ2 828 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 GIGYF2Q6Y7W6 1299 aaKnown RBP20.79■□□□□ 0.92
UBE3C-201ENST00000348165 COPRSQ9NQ92 184 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 NOD1Q9Y239 953 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 BLZF1Q9H2G9 400 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 ROBO2Q9HCK4 1378 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 CABP7Q86V35 215 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 C2CD5Q86YS7 1000 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 RRAGDQ9NQL2 400 aaPredicted RBP20.79■□□□□ 0.92
UBE3C-201ENST00000348165 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 ATP2B4P23634 1241 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 POSTNQ15063 836 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 HOOK2Q96ED9 719 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 PLEKHG1Q9ULL1 1385 aa20.79■□□□□ 0.92
UBE3C-201ENST00000348165 TNKSO95271 1327 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 ZSCAN10Q96SZ4 725 aaPredicted RBP20.78■□□□□ 0.92
UBE3C-201ENST00000348165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.78■□□□□ 0.92
UBE3C-201ENST00000348165 TLDC2A0PJX2 215 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 IGSF3O75054 1194 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 TNFAIP3P21580 790 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 HS1BP3Q53T59 392 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 CCDC25Q86WR0 208 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 TAB2Q9NYJ8 693 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 SPATA31E1Q6ZUB1 1445 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 H7C1D1 291 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 MYCT1Q8N699 235 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 OTUD6BQ8N6M0 293 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 DBNLQ9UJU6 430 aaKnown RBP20.78■□□□□ 0.92
UBE3C-201ENST00000348165 MYOM2P54296 1465 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 PABPN1LA6NDY0 278 aaKnown RBP20.78■□□□□ 0.92
UBE3C-201ENST00000348165 SMIM23A6NLE4 172 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 FANCBQ8NB91 859 aa20.78■□□□□ 0.92
UBE3C-201ENST00000348165 AATKQ6ZMQ8 1374 aa20.77■□□□□ 0.92
UBE3C-201ENST00000348165 GOLGA8HP0CJ92 632 aa20.77■□□□□ 0.92
UBE3C-201ENST00000348165 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.77■□□□□ 0.92
UBE3C-201ENST00000348165 ZNF274Q96GC6 653 aaPredicted RBP20.77■□□□□ 0.92
UBE3C-201ENST00000348165 QTRT2Q9H974 415 aaKnown RBP20.77■□□□□ 0.92
UBE3C-201ENST00000348165 GPHNQ9NQX3 736 aaPredicted RBP20.77■□□□□ 0.92
UBE3C-201ENST00000348165 TPCN1Q9ULQ1 816 aa20.77■□□□□ 0.92
UBE3C-201ENST00000348165 STRN3Q13033 797 aa20.77■□□□□ 0.92
UBE3C-201ENST00000348165 TRMT44Q8IYL2 757 aaKnown RBP20.77■□□□□ 0.92
UBE3C-201ENST00000348165 PNMA1Q8ND90 353 aa20.77■□□□□ 0.92
UBE3C-201ENST00000348165 ATRIPQ8WXE1 791 aa20.77■□□□□ 0.91
UBE3C-201ENST00000348165 TLR7Q9NYK1 1049 aaKnown RBP20.77■□□□□ 0.91
UBE3C-201ENST00000348165 PRR36Q9H6K5 1346 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 BRD1O95696 1058 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 LRRC47Q8N1G4 583 aaKnown RBP20.76■□□□□ 0.91
UBE3C-201ENST00000348165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.76■□□□□ 0.91
UBE3C-201ENST00000348165 FRMPD2Q68DX3 1309 aaPredicted RBP20.76■□□□□ 0.91
UBE3C-201ENST00000348165 TCP10L2B9ZVM9 353 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 STX10O60499 249 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 ARL1P40616 181 aaPredicted RBP20.76■□□□□ 0.91
UBE3C-201ENST00000348165 TAF12Q16514 161 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 BRDTQ58F21 947 aaPredicted RBP20.76■□□□□ 0.91
UBE3C-201ENST00000348165 LMBRD1Q9NUN5 540 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 EFCAB6Q5THR3 1501 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 CALUO43852 315 aaPredicted RBP20.76■□□□□ 0.91
UBE3C-201ENST00000348165 BTDP43251 543 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 NLRP12P59046 1061 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 DKC1O60832 514 aaKnown RBP eCLIP20.76■□□□□ 0.91
UBE3C-201ENST00000348165 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 LRRC45Q96CN5 670 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 SERTAD1Q9UHV2 236 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 UGGT1Q9NYU2 1555 aa20.76■□□□□ 0.91
UBE3C-201ENST00000348165 SPOPO43791 374 aa20.75■□□□□ 0.91
UBE3C-201ENST00000348165 KRT9P35527 623 aa20.75■□□□□ 0.91
UBE3C-201ENST00000348165 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
UBE3C-201ENST00000348165 VAV2P52735 878 aa20.75■□□□□ 0.91
UBE3C-201ENST00000348165 RNASE9P60153 205 aaKnown RBP20.75■□□□□ 0.91
UBE3C-201ENST00000348165 ERVK-7P63135 1459 aa20.75■□□□□ 0.91
UBE3C-201ENST00000348165 EXOC3O60645 756 aa20.75■□□□□ 0.91
UBE3C-201ENST00000348165 PPP1R7Q15435 360 aa20.75■□□□□ 0.91
UBE3C-201ENST00000348165 AZI2Q9H6S1 392 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms