RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 NDUFB9Q9Y6M9 179 aa18.12■□□□□ 0.49
HMGA1-202ENST00000347617 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
HMGA1-202ENST00000347617 USP5P45974 858 aa18.12■□□□□ 0.49
HMGA1-202ENST00000347617 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
HMGA1-202ENST00000347617 AMIGO3Q86WK7 504 aa18.12■□□□□ 0.49
HMGA1-202ENST00000347617 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 VGLL3A8MV65 326 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 MYO1CO00159 1063 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 MCAMP43121 646 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 ZAP70P43403 619 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 ST5P78524 1137 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 GUCY1B3Q02153 619 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 CHRNDQ07001 517 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 GNL2Q13823 731 aaKnown RBP18.11■□□□□ 0.49
HMGA1-202ENST00000347617 LONRF2Q1L5Z9 754 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 HDXQ7Z353 690 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 ERCC4Q92889 916 aaPredicted RBP18.11■□□□□ 0.49
HMGA1-202ENST00000347617 ACBD3Q9H3P7 528 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 ADAM21Q9UKJ8 722 aa18.11■□□□□ 0.49
HMGA1-202ENST00000347617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
HMGA1-202ENST00000347617 BIN1O00499 593 aa18.1■□□□□ 0.49
HMGA1-202ENST00000347617 SCARF1Q14162 830 aa18.1■□□□□ 0.49
HMGA1-202ENST00000347617 CT47A1Q5JQC4 288 aaPredicted RBP18.1■□□□□ 0.49
HMGA1-202ENST00000347617 KIFC2Q96AC6 838 aa18.1■□□□□ 0.49
HMGA1-202ENST00000347617 NAA15Q9BXJ9 866 aaKnown RBP18.1■□□□□ 0.49
HMGA1-202ENST00000347617 NCOA5Q9HCD5 579 aaKnown RBP18.1■□□□□ 0.49
HMGA1-202ENST00000347617 MKRN1Q9UHC7 482 aaKnown RBP18.1■□□□□ 0.49
HMGA1-202ENST00000347617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.09■□□□□ 0.49
HMGA1-202ENST00000347617 ATP1A3P13637 1013 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 RXRBP28702 533 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 RPS8P62241 208 aaKnown RBP18.09■□□□□ 0.49
HMGA1-202ENST00000347617 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
HMGA1-202ENST00000347617 TXNRD1Q16881 649 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 SRGAP1Q7Z6B7 1085 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 SRLQ86TD4 932 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 MSANTD4Q8NCY6 345 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 APPBP2Q92624 585 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 SEC62Q99442 399 aaKnown RBP18.09■□□□□ 0.49
HMGA1-202ENST00000347617 YY1AP1Q9H869 796 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 RAB21Q9UL25 225 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 CUTAO60888 179 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 HSPD1P10809 573 aaKnown RBP18.09■□□□□ 0.49
HMGA1-202ENST00000347617 PHKA1P46020 1223 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 NFIXQ14938 502 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 UBE3CQ15386 1083 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 SPECC1LQ69YQ0 1117 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 HELBQ8NG08 1087 aaPredicted RBP18.09■□□□□ 0.49
HMGA1-202ENST00000347617 ANKRD2Q9GZV1 360 aa18.09■□□□□ 0.49
HMGA1-202ENST00000347617 CDKL5O76039 1030 aa18.08■□□□□ 0.48
HMGA1-202ENST00000347617 TM4SF1P30408 202 aa18.08■□□□□ 0.48
HMGA1-202ENST00000347617 RESP18Q5W5W9 173 aa18.08■□□□□ 0.48
HMGA1-202ENST00000347617 PROM2Q8N271 834 aa18.08■□□□□ 0.48
HMGA1-202ENST00000347617 MINPP1Q9UNW1 487 aa18.08■□□□□ 0.48
HMGA1-202ENST00000347617 FANCGO15287 622 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 CCDC175P0C221 793 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 GYS1P13807 737 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 TRIML1Q8N9V2 468 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 DPF2Q92785 391 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 PANX2Q96RD6 677 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 RRP15Q9Y3B9 282 aaKnown RBP18.07■□□□□ 0.48
HMGA1-202ENST00000347617 MAST3O60307 1309 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 CPLX1O14810 134 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 LMAN1P49257 510 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 CHMP4BP1P59074 171 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 MLKLQ8NB16 471 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 SPATA5Q8NB90 893 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 FLAD1Q8NFF5 587 aa18.07■□□□□ 0.48
HMGA1-202ENST00000347617 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.07■□□□□ 0.48
HMGA1-202ENST00000347617 ZNF804BA4D1E1 1349 aa18.06■□□□□ 0.48
HMGA1-202ENST00000347617 POLR3DP05423 398 aaPredicted RBP18.06■□□□□ 0.48
HMGA1-202ENST00000347617 ADD2P35612 726 aa18.06■□□□□ 0.48
HMGA1-202ENST00000347617 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
HMGA1-202ENST00000347617 ENOX1Q8TC92 643 aaKnown RBP18.06■□□□□ 0.48
HMGA1-202ENST00000347617 OSBP2Q969R2 916 aa18.06■□□□□ 0.48
HMGA1-202ENST00000347617 WDR24Q96S15 920 aa18.06■□□□□ 0.48
HMGA1-202ENST00000347617 GNL3LQ9NVN8 582 aaKnown RBP18.06■□□□□ 0.48
HMGA1-202ENST00000347617 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
HMGA1-202ENST00000347617 MROH7-TTC4A0A0A0MT08 1334 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 CASZ1Q86V15 1759 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 TC2NQ8N9U0 490 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 CNBD1Q8NA66 436 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 CCDC34Q96HJ3 373 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 BRMS1Q9HCU9 246 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 RSPH14Q9UHP6 348 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 MYH7P12883 1935 aa18.05■□□□□ 0.48
HMGA1-202ENST00000347617 SEMA3EO15041 775 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 CPLX2Q6PUV4 134 aaKnown RBP18.04■□□□□ 0.48
HMGA1-202ENST00000347617 FAM71BQ8TC56 605 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
HMGA1-202ENST00000347617 CELF1Q92879 486 aaKnown RBP18.04■□□□□ 0.48
HMGA1-202ENST00000347617 DHX58Q96C10 678 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 FANCLQ9NW38 375 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 KLF18A0A0U1RQI7 1052 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 KIF5CO60282 957 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 MAP3K12Q12852 859 aa18.04■□□□□ 0.48
HMGA1-202ENST00000347617 BEND6Q5SZJ8 279 aaPredicted RBP18.04■□□□□ 0.48
HMGA1-202ENST00000347617 KANK3Q6NY19 840 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms