RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 VPS16Q9H269 839 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
LMNA-201ENST00000347559 ATP1A1P05023 1023 aaKnown RBP17.34■□□□□ 0.37
LMNA-201ENST00000347559 TDO2P48775 406 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 PPFIA1Q13136 1202 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 TMTC1Q8IUR5 882 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 SYNRGQ9UMZ2 1314 aa17.33■□□□□ 0.37
LMNA-201ENST00000347559 ZC3H4Q9UPT8 1303 aaKnown RBP17.33■□□□□ 0.37
LMNA-201ENST00000347559 NDUFAB1O14561 156 aa17.33■□□□□ 0.37
LMNA-201ENST00000347559 N4BP3O15049 544 aa17.33■□□□□ 0.37
LMNA-201ENST00000347559 OTUD6BQ8N6M0 293 aa17.33■□□□□ 0.37
LMNA-201ENST00000347559 CENPHQ9H3R5 247 aa17.33■□□□□ 0.37
LMNA-201ENST00000347559 CD248Q9HCU0 757 aa17.33■□□□□ 0.37
LMNA-201ENST00000347559 SHOX2O60902 331 aaPredicted RBP17.33■□□□□ 0.36
LMNA-201ENST00000347559 MCM3P25205 808 aa17.33■□□□□ 0.36
LMNA-201ENST00000347559 SLC39A6Q13433 755 aa17.33■□□□□ 0.36
LMNA-201ENST00000347559 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
LMNA-201ENST00000347559 SND1Q7KZF4 910 aaKnown RBP eCLIP17.33■□□□□ 0.361e-8■■□□□ 12.8
LMNA-201ENST00000347559 MB21D2Q8IYB1 491 aaPredicted RBP17.33■□□□□ 0.36
LMNA-201ENST00000347559 CHP1Q99653 195 aa17.33■□□□□ 0.36
LMNA-201ENST00000347559 FAM237AA0A1B0GTK4 181 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 APTXQ7Z2E3 356 aaKnown RBP17.32■□□□□ 0.36
LMNA-201ENST00000347559 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 SAR1BQ9Y6B6 198 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 PES1O00541 588 aaKnown RBP17.32■□□□□ 0.36
LMNA-201ENST00000347559 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
LMNA-201ENST00000347559 ZEB2O60315 1214 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 CD44P16070 742 aaKnown RBP17.32■□□□□ 0.36
LMNA-201ENST00000347559 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
LMNA-201ENST00000347559 KRT9P35527 623 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 SPATA1Q5VX52 437 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 NFXL1Q6ZNB6 911 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 CCDC82Q8N4S0 544 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 CABS1Q96KC9 395 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 A0A087WZG4 1122 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 BTBD18B2RXH4 712 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 EIF3HO15372 352 aaKnown RBP eCLIP17.32■□□□□ 0.36
LMNA-201ENST00000347559 IARSP41252 1262 aaKnown RBP17.32■□□□□ 0.36
LMNA-201ENST00000347559 PDCLQ13371 301 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
LMNA-201ENST00000347559 ABHD10Q9NUJ1 306 aa17.32■□□□□ 0.36
LMNA-201ENST00000347559 ZNF213O14771 459 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 ZNF185O15231 689 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 ATP1A2P50993 1020 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 SLC26A6Q9BXS9 759 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 SENP2Q9HC62 589 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 SCP2P22307 547 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 SARSP49591 514 aaKnown RBP17.31■□□□□ 0.36
LMNA-201ENST00000347559 HDGFP51858 240 aaKnown RBP17.31■□□□□ 0.36
LMNA-201ENST00000347559 TRAPPC11Q7Z392 1133 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 STAMQ92783 540 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 KCNJ14Q9UNX9 436 aa17.31■□□□□ 0.36
LMNA-201ENST00000347559 ERCC5P28715 1186 aaPredicted RBP17.3■□□□□ 0.36
LMNA-201ENST00000347559 C2orf54Q08AI8 447 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 CCDC122Q5T0U0 273 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 RNF187Q5TA31 235 aaPredicted RBP17.3■□□□□ 0.36
LMNA-201ENST00000347559 RRP36Q96EU6 259 aaKnown RBP17.3■□□□□ 0.36
LMNA-201ENST00000347559 TAB2Q9NYJ8 693 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 MYO1AQ9UBC5 1043 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 ZMYM6O95789 1325 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 PPARDQ03181 441 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 CNPY4Q8N129 248 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
LMNA-201ENST00000347559 CDKL5O76039 1030 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 PBX1P40424 430 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 MATR3P43243 847 aaKnown RBP eCLIP17.3■□□□□ 0.36
LMNA-201ENST00000347559 PDIA6Q15084 440 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 CCNI2Q6ZMN8 369 aaPredicted RBP17.3■□□□□ 0.36
LMNA-201ENST00000347559 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
LMNA-201ENST00000347559 EPN1Q9Y6I3 576 aaPredicted RBP17.3■□□□□ 0.36
LMNA-201ENST00000347559 KCTD16Q68DU8 428 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.362e-8■■□□□ 11.8
LMNA-201ENST00000347559 JAKMIP2Q96AA8 810 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 METTL22Q9BUU2 404 aaPredicted RBP17.29■□□□□ 0.36
LMNA-201ENST00000347559 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 NWD1Q149M9 1564 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 GRIN2DO15399 1336 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 ANKARQ7Z5J8 1434 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
LMNA-201ENST00000347559 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
LMNA-201ENST00000347559 NKX2-3Q8TAU0 364 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 RUFY1Q96T51 708 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 CTNND2Q9UQB3 1225 aa17.29■□□□□ 0.36
LMNA-201ENST00000347559 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 NBPF14Q5TI25 921 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 TRIML1Q8N9V2 468 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 CCDC51Q96ER9 411 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 KIF1CO43896 1103 aaKnown RBP17.28■□□□□ 0.36
LMNA-201ENST00000347559 NDUFA10O95299 355 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 NOSTRINQ8IVI9 506 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 FBXO2Q9UK22 296 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms