RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 METTL16Q86W50 562 aaKnown RBP12.86□□□□□ -0.35
ECM1-201ENST00000346569 DGKHQ86XP1 1220 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 ZNF784Q8NCA9 323 aaPredicted RBP12.86□□□□□ -0.35
ECM1-201ENST00000346569 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 DPF2Q92785 391 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 DHX36Q9H2U1 1008 aaKnown RBP12.86□□□□□ -0.35
ECM1-201ENST00000346569 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
ECM1-201ENST00000346569 MTMR6Q9Y217 621 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 SLC12A7Q9Y666 1083 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 DDX60LQ5H9U9 1706 aaKnown RBP12.86□□□□□ -0.35
ECM1-201ENST00000346569 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
ECM1-201ENST00000346569 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
ECM1-201ENST00000346569 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
ECM1-201ENST00000346569 CACNB3P54284 484 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
ECM1-201ENST00000346569 TROAPQ12815 778 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 PPP2R5BQ15173 497 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 DLGAP5Q15398 846 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 SYNE3Q6ZMZ3 975 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 ZNF654Q8IZM8 581 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 EHD4Q9H223 541 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
ECM1-201ENST00000346569 MYH1P12882 1939 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 LAMB1P07942 1786 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 NMT2O60551 498 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
ECM1-201ENST00000346569 IFIT1BQ5T764 474 aaKnown RBP12.84□□□□□ -0.35
ECM1-201ENST00000346569 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 RAB11FIP4Q86YS3 637 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 FOXP4Q8IVH2 680 aaPredicted RBP12.84□□□□□ -0.35
ECM1-201ENST00000346569 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 MYL10Q9BUA6 226 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
ECM1-201ENST00000346569 ZNF70Q9UC06 446 aaPredicted RBP12.84□□□□□ -0.35
ECM1-201ENST00000346569 SWAP70Q9UH65 585 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 NAV1Q8NEY1 1877 aa12.84□□□□□ -0.35
ECM1-201ENST00000346569 CEP350Q5VT06 3117 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 IFNAR1P17181 557 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 RXRAP19793 462 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 SHMT1P34896 483 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 EIF6P56537 245 aaKnown RBP12.83□□□□□ -0.36
ECM1-201ENST00000346569 TCP10Q12799 353 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 MICU3Q86XE3 530 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 RGS22Q8NE09 1264 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 DDX11Q96FC9 970 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 ATRNL1Q5VV63 1379 aa12.83□□□□□ -0.36
ECM1-201ENST00000346569 IGKV6D-41A0A0C4DH26 115 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 WNT10BO00744 389 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 CPLX1O14810 134 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 LMNB1P20700 586 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 FOXD4L5Q5VV16 416 aaPredicted RBP12.82□□□□□ -0.36
ECM1-201ENST00000346569 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 FOXD4L4Q8WXT5 416 aaPredicted RBP12.82□□□□□ -0.36
ECM1-201ENST00000346569 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 MAP3K14Q99558 947 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
ECM1-201ENST00000346569 COL2A1P02458 1487 aaPredicted RBP12.82□□□□□ -0.36
ECM1-201ENST00000346569 ECM29Q5VYK3 1845 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CCDC196A0A1B0GTZ2 297 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 SHTN1A0MZ66 631 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 DDAH1O94760 285 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 F13A1P00488 732 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CALM1P0DP23 149 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CALM2P0DP24 149 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CALM3P0DP25 149 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 FUT2Q10981 343 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 RTN1Q16799 776 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 TATDN1Q6P1N9 297 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
ECM1-201ENST00000346569 CATIPQ7Z7H3 387 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 NBPF11Q86T75 865 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CCDC144CPQ8IYA2 1237 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
ECM1-201ENST00000346569 FAM184AQ8NB25 1140 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
ECM1-201ENST00000346569 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CNOT7Q9UIV1 285 aaKnown RBP12.81□□□□□ -0.36
ECM1-201ENST00000346569 KIF3AQ9Y496 699 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 PLIN4Q96Q06 1357 aa12.81□□□□□ -0.36
ECM1-201ENST00000346569 CLRN2A0PK11 232 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 CDKL5O76039 1030 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms