RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ATP8B2P98198 1209 aa21.4■■□□□ 1.02
HDAC4-201ENST00000345617 CCDC93Q567U6 631 aa21.4■■□□□ 1.02
HDAC4-201ENST00000345617 NAA16Q6N069 864 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-201ENST00000345617 USP26Q9BXU7 913 aa21.4■■□□□ 1.02
HDAC4-201ENST00000345617 ZNF202O95125 648 aa21.4■■□□□ 1.02
HDAC4-201ENST00000345617 PSMD6Q15008 389 aa21.4■■□□□ 1.02
HDAC4-201ENST00000345617 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
HDAC4-201ENST00000345617 YWHAEP62258 255 aaKnown RBP21.4■■□□□ 1.02
HDAC4-201ENST00000345617 MAP3K7CLP57077 242 aa21.39■■□□□ 1.02
HDAC4-201ENST00000345617 RIC8AQ9NPQ8 531 aa21.39■■□□□ 1.02
HDAC4-201ENST00000345617 CARD6Q9BX69 1037 aa21.39■■□□□ 1.02
HDAC4-201ENST00000345617 IBTKQ9P2D0 1353 aaPredicted RBP21.39■■□□□ 1.02
HDAC4-201ENST00000345617 MAGEB6P1A0A0J9YX57 407 aa21.39■■□□□ 1.01
HDAC4-201ENST00000345617 EIF3DO15371 548 aaKnown RBP eCLIP21.39■■□□□ 1.011e-6■■□□□ 13.9
HDAC4-201ENST00000345617 BAG5Q9UL15 447 aa21.39■■□□□ 1.01
HDAC4-201ENST00000345617 ARHGAP42A6NI28 874 aa21.39■■□□□ 1.01
HDAC4-201ENST00000345617 DKC1O60832 514 aaKnown RBP eCLIP21.39■■□□□ 1.014e-7■■■■■ 35.8
HDAC4-201ENST00000345617 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.01
HDAC4-201ENST00000345617 RASIP1Q5U651 963 aa21.39■■□□□ 1.01
HDAC4-201ENST00000345617 PDCD7Q8N8D1 485 aaKnown RBP21.39■■□□□ 1.01
HDAC4-201ENST00000345617 FBXO41Q8TF61 875 aa21.39■■□□□ 1.01
HDAC4-201ENST00000345617 SCOCQ9UIL1 159 aa21.39■■□□□ 1.01
HDAC4-201ENST00000345617 AMFRQ9UKV5 643 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 RPS6KA2Q15349 733 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 WDR46O15213 610 aaKnown RBP21.38■■□□□ 1.01
HDAC4-201ENST00000345617 NMIQ13287 307 aaPredicted RBP21.38■■□□□ 1.01
HDAC4-201ENST00000345617 TRIM42Q8IWZ5 723 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 TEKT1Q969V4 418 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 PSDA5PKW4 1024 aaPredicted RBP21.38■■□□□ 1.01
HDAC4-201ENST00000345617 STX17P56962 302 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 NLRP7Q8WX94 980 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 A0A1B0GVL5 298 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 TSHZ3Q63HK5 1081 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 BCL2L12Q9HB09 334 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 RPS6KB1P23443 525 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 LMNB2Q03252 620 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 LRRC23Q53EV4 343 aaPredicted RBP21.38■■□□□ 1.01
HDAC4-201ENST00000345617 PHEXP78562 749 aa21.38■■□□□ 1.01
HDAC4-201ENST00000345617 POLR3AO14802 1390 aaPredicted RBP21.38■■□□□ 1.01
HDAC4-201ENST00000345617 EFHD1Q9BUP0 239 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 PFDN6O15212 129 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 SH2D4AQ9H788 454 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 AMOTL2Q9Y2J4 779 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 PARP1P09874 1014 aaKnown RBP21.37■■□□□ 1.01
HDAC4-201ENST00000345617 CYP7A1P22680 504 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 PPP1R21Q6ZMI0 780 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 MIS12Q9H081 205 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 CEP104O60308 925 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 TSC1Q92574 1164 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 HELBQ8NG08 1087 aaPredicted RBP21.37■■□□□ 1.01
HDAC4-201ENST00000345617 SCINQ9Y6U3 715 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 CDC25BP30305 580 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 NSMCE1Q8WV22 266 aa21.37■■□□□ 1.01
HDAC4-201ENST00000345617 POLR2DO15514 142 aaKnown RBP21.36■■□□□ 1.01
HDAC4-201ENST00000345617 ANGEL1Q9UNK9 670 aaKnown RBP21.36■■□□□ 1.01
HDAC4-201ENST00000345617 SKIP12755 728 aa21.36■■□□□ 1.01
HDAC4-201ENST00000345617 CLTAP09496 248 aa21.36■■□□□ 1.01
HDAC4-201ENST00000345617 GNGT1P63211 74 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 SPECC1L-ADORA2AF8WAN1 911 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 DCUN1D2Q6PH85 259 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 KDM3AQ9Y4C1 1321 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 IGSF3O75054 1194 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 TTLL12Q14166 644 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-201ENST00000345617 PODNQ7Z5L7 613 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 CBX8Q9HC52 389 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 GOLGA8CPA6NN73 597 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 THAP12O43422 761 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 P4HA1P13674 534 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 BIRC3Q13489 604 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 CCDC197Q8NCU1 140 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 CTTNBP2NLQ9P2B4 639 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 SERPINB6P35237 376 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 TRIML1Q8N9V2 468 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 CXorf38Q8TB03 319 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 TCP1P17987 556 aaKnown RBP21.35■■□□□ 1.01
HDAC4-201ENST00000345617 IWS1Q96ST2 819 aa21.35■■□□□ 1.01
HDAC4-201ENST00000345617 ADGRL1O94910 1474 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 CNPY4Q8N129 248 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 BCAS4Q8TDM0 211 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 CHMLP26374 656 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 PEX19P40855 299 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 PLEKHM2Q8IWE5 1019 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 DAPK3O43293 454 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 CCNT1O60563 726 aaKnown RBP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 IL9RQ01113 521 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 SND1Q7KZF4 910 aaKnown RBP eCLIP21.34■■□□□ 1.012e-7■■■■■ 27.5
HDAC4-201ENST00000345617 ZNF622Q969S3 477 aaKnown RBP eCLIP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 INSRP06213 1382 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 NBPF9Q3BBW0 867 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 MPRIPQ6WCQ1 1025 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 GFM2Q969S9 779 aaKnown RBP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 LRRC2Q9BYS8 371 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 ZNF277Q9NRM2 450 aaPredicted RBP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 BZW2Q9Y6E2 419 aaKnown RBP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 KIF1CO43896 1103 aaKnown RBP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 PAXIP1Q6ZW49 1069 aaPredicted RBP21.34■■□□□ 1.01
HDAC4-201ENST00000345617 PCDHB15Q9Y5E8 787 aa21.34■■□□□ 1.01
HDAC4-201ENST00000345617 CCDC13Q8IYE1 715 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms