RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 CATIPQ7Z7H3 387 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 PCDHA5Q9Y5H7 936 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 POLR2DO15514 142 aaKnown RBP17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 RILPL1Q5EBL4 403 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 FAM47AQ5JRC9 791 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 GRAMD1CQ8IYS0 662 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 NSUN4Q96CB9 384 aaKnown RBP17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 NEMFO60524 1076 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 CYP2D6P10635 497 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 FANCCQ00597 558 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 IQCA1Q86XH1 822 aa17.11■□□□□ 0.33
VIPAS39-202ENST00000343765 COL5A3P25940 1745 aaPredicted RBP17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 CNTNAP4Q9C0A0 1308 aa17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 FAM237AA0A1B0GTK4 181 aa17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 OLFM4Q6UX06 510 aa17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
VIPAS39-202ENST00000343765 SERPINC1P01008 464 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 EARS2Q5JPH6 523 aaKnown RBP17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 MTA3Q9BTC8 594 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 RNF26Q9BY78 433 aaPredicted RBP17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 HSD3B7Q9H2F3 369 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 PTPREP23469 700 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 GSDMDP57764 484 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 MYL5Q02045 173 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 PDE4BQ07343 736 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 PKN1Q16512 942 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 ZNF827Q17R98 1081 aa17.09■□□□□ 0.33
VIPAS39-202ENST00000343765 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.33
VIPAS39-202ENST00000343765 CEP135Q66GS9 1140 aa17.08■□□□□ 0.33
VIPAS39-202ENST00000343765 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.33
VIPAS39-202ENST00000343765 DPF2Q92785 391 aa17.08■□□□□ 0.33
VIPAS39-202ENST00000343765 MAP7D2Q96T17 732 aa17.08■□□□□ 0.33
VIPAS39-202ENST00000343765 IKBKBO14920 756 aa17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 BMP6P22004 513 aa17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 RCAN1P53805 252 aa17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 NOM1Q5C9Z4 860 aaKnown RBP17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 OSBPL5Q9H0X9 879 aaPredicted RBP17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 CSRNP2Q9H175 543 aa17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 DUOX1Q9NRD9 1551 aa17.08■□□□□ 0.32
VIPAS39-202ENST00000343765 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 XBP1P17861 261 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 POSTNQ15063 836 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 FANCLQ9NW38 375 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 SFPQP23246 707 aaKnown RBP eCLIP17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 KRT2P35908 639 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 UBASH3AP57075 661 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 FUT2Q10981 343 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 IMPACTQ9P2X3 320 aa17.07■□□□□ 0.32
VIPAS39-202ENST00000343765 WNT7AO00755 349 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 TROAPQ12815 778 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 PTPN14Q15678 1187 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 MAN1B1Q9UKM7 699 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 RTCBQ9Y3I0 505 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 A0A1B0GUL6 1792 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 CCAR2Q8N163 923 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 LTBP4Q8N2S1 1624 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 SCN7AQ01118 1682 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 TRIM75PA6NK02 468 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 SRPRBQ9Y5M8 271 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-202ENST00000343765 SEMA3EO15041 775 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 GOLGA8FQ08AF8 430 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 GOLGA8DPQ0D2H9 430 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 CCDC112Q8NEF3 446 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 DHX58Q96C10 678 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 CASZ1Q86V15 1759 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 TSPY2A6NKD2 308 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 TMEM232C9JQI7 657 aa17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 PRPF3O43395 683 aaKnown RBP17.05■□□□□ 0.32
VIPAS39-202ENST00000343765 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms