RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PTPROQ16827 1216 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 RGS22Q8NE09 1264 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ATRIPQ8WXE1 791 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 PARD6BQ9BYG5 372 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ZNF652Q9Y2D9 606 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 GYG1P46976 350 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 PAK1Q13153 545 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 E4F1Q66K89 784 aaPredicted RBP14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ANKRD13CQ8N6S4 541 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 KAZALD1Q96I82 304 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 RASSF4Q9H2L5 321 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ERBB3P21860 1342 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 CYP2D7A0A087X1C5 515 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 MRPS25P82663 173 aaKnown RBP14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 SARM1Q6SZW1 724 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 CSGALNACT2Q8N6G5 542 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 NELFBQ8WX92 580 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 LPIN2Q92539 896 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 TNKSO95271 1327 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 USP17L12C9JPN9 530 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 USP17L21D6R901 530 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 RBL2Q08999 1139 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 BMP15O95972 392 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 MCM3P25205 808 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 RAD51AP2Q09MP3 1159 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 TOGARAM2Q6ZUX3 1019 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 SYMPKQ92797 1274 aaKnown RBP14□□□□□ -0.17
SNRNP48-201ENST00000342415 DENND2AQ9ULE3 1009 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 PCDH11XQ9BZA7 1347 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 PCDH11YQ9BZA8 1340 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 TACC1O75410 805 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 HNRNPH2P55795 449 aaKnown RBP14□□□□□ -0.17
SNRNP48-201ENST00000342415 CCZ1BP86790 482 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 CCZ1P86791 482 aaPredicted RBP14□□□□□ -0.17
SNRNP48-201ENST00000342415 PDE4DQ08499 809 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 PTGDRQ13258 359 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 NGLY1Q96IV0 654 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 TSG101Q99816 390 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 SAP30BPQ9UHR5 308 aaKnown RBP14□□□□□ -0.17
SNRNP48-201ENST00000342415 MAN1B1Q9UKM7 699 aa14□□□□□ -0.17
SNRNP48-201ENST00000342415 CTDNEP1O95476 244 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 ZNF76P36508 570 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 KRT83P78385 493 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 DYMQ7RTS9 669 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 NBPF11Q86T75 865 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 NOC4LQ9BVI4 516 aaKnown RBP13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 FAM207AQ9NSI2 230 aaPredicted RBP13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 BTG4Q9NY30 223 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 SH3TC1Q8TE82 1336 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 IFFO1Q0D2I5 559 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 MTF1Q14872 753 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 LONRF2Q1L5Z9 754 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 TMEM266Q2M3C6 531 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 CYP26C1Q6V0L0 522 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 RASGRP4Q8TDF6 673 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 PDE8AO60658 829 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 GNAT2P19087 354 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 CDC27P30260 824 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 CYB5R4Q7L1T6 521 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 SMARCC2Q8TAQ2 1214 aa13.99□□□□□ -0.17
SNRNP48-201ENST00000342415 MYOM1P52179 1685 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 STX10O60499 249 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 AMPD3Q01432 767 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 TTC19Q6DKK2 380 aaPredicted RBP13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 TBC1D10CQ8IV04 446 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 VSTM4Q8IW00 320 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 SPAG5Q96R06 1193 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 PIH1D3Q9NQM4 214 aaKnown RBP13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 SEC31BQ9NQW1 1179 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 ZNF609O15014 1411 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 UBE2Q2LH0YL09 131 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 C6orf229H3BNL8 230 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 MCAMP43121 646 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 TNNI2P48788 182 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 CKAP4Q07065 602 aaKnown RBP13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 PDE8BO95263 885 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 IVLP07476 585 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 PICALMQ13492 652 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 TMTC1Q8IUR5 882 aa13.98□□□□□ -0.17
SNRNP48-201ENST00000342415 IKBKBO14920 756 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 HSF2BPO75031 334 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 TXKP42681 527 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 CTSWP56202 376 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 PPARAQ07869 468 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 SYCP1Q15431 976 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 NBPF5PQ86XG9 351 aaPredicted RBP13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 USP8P40818 1118 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 EHBP1Q8NDI1 1231 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 WDR24Q96S15 920 aa13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
SNRNP48-201ENST00000342415 SND1Q7KZF4 910 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms