RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 EHD4Q9H223 541 aa22.75■■□□□ 1.23
GTF3C5-201ENST00000342018 SWAP70Q9UH65 585 aa22.75■■□□□ 1.23
GTF3C5-201ENST00000342018 ANGEL1Q9UNK9 670 aaKnown RBP22.75■■□□□ 1.23
GTF3C5-201ENST00000342018 NFXL1Q6ZNB6 911 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 IGDCC4Q8TDY8 1250 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 ZSCAN10Q96SZ4 725 aaPredicted RBP22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 DNAJC18Q9H819 358 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 SENP2Q9HC62 589 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 TNKSO95271 1327 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 EPHX2P34913 555 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 ME3Q16798 604 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 FOXP4Q8IVH2 680 aaPredicted RBP22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 DEFB129Q9H1M3 183 aa22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 COL2A1P02458 1487 aaPredicted RBP22.74■■□□□ 1.23
GTF3C5-201ENST00000342018 SIPA1L1O43166 1804 aa22.73■■□□□ 1.23
GTF3C5-201ENST00000342018 SHMT1P34896 483 aa22.73■■□□□ 1.23
GTF3C5-201ENST00000342018 WTAPQ15007 396 aa22.73■■□□□ 1.23
GTF3C5-201ENST00000342018 RAB11FIP4Q86YS3 637 aa22.73■■□□□ 1.23
GTF3C5-201ENST00000342018 AGXT2Q9BYV1 514 aa22.73■■□□□ 1.23
GTF3C5-201ENST00000342018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.73■■□□□ 1.23
GTF3C5-201ENST00000342018 LY9Q9HBG7 655 aa22.73■■□□□ 1.23
GTF3C5-201ENST00000342018 MIGA2Q7L4E1 593 aa22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 APOBEC3FQ8IUX4 373 aaKnown RBP22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 NECAB1Q8N987 351 aa22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 ZSCAN31Q96LW9 406 aaPredicted RBP22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 KLF18A0A0U1RQI7 1052 aa22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 MPHOSPH10O00566 681 aaKnown RBP22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 EAPPQ56P03 285 aaPredicted RBP22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 PRAMEF18Q5VWM3 479 aa22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 BRPF3Q9ULD4 1205 aa22.72■■□□□ 1.23
GTF3C5-201ENST00000342018 AKR1B1P15121 316 aa22.71■■□□□ 1.23
GTF3C5-201ENST00000342018 ENAHQ8N8S7 591 aaPredicted RBP22.71■■□□□ 1.23
GTF3C5-201ENST00000342018 MYH8P13535 1937 aa22.71■■□□□ 1.23
GTF3C5-201ENST00000342018 IQCA1LA6NCM1 817 aa22.7■■□□□ 1.23
GTF3C5-201ENST00000342018 CCDC69A6NI79 296 aa22.7■■□□□ 1.23
GTF3C5-201ENST00000342018 CCDC83Q8IWF9 413 aa22.7■■□□□ 1.23
GTF3C5-201ENST00000342018 FBXL16Q8N461 479 aa22.7■■□□□ 1.23
GTF3C5-201ENST00000342018 IL17RBQ9NRM6 502 aa22.7■■□□□ 1.23
GTF3C5-201ENST00000342018 CERKLQ49MI3 558 aaPredicted RBP22.7■■□□□ 1.22
GTF3C5-201ENST00000342018 IFIT1BQ5T764 474 aaKnown RBP22.7■■□□□ 1.22
GTF3C5-201ENST00000342018 SH2B1Q9NRF2 756 aaPredicted RBP22.7■■□□□ 1.22
GTF3C5-201ENST00000342018 GOLGA8BA8MQT2 603 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 DTNBO60941 627 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 SEC23AQ15436 765 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 USP50Q70EL3 339 aaPredicted RBP22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 DCPSQ96C86 337 aaKnown RBP22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 TEPSINQ96N21 525 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 MYL10Q9BUA6 226 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 SLKQ9H2G2 1235 aaPredicted RBP22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 TAF1DQ9H5J8 278 aaPredicted RBP22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 PGAP2Q9UHJ9 254 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 HERC5Q9UII4 1024 aaKnown RBP22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 POTECB2RU33 542 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 GDF11O95390 407 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 RXRAP19793 462 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 LIFRP42702 1097 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 CCT2P78371 535 aaKnown RBP22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 SHROOM1Q2M3G4 852 aaPredicted RBP22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 NEDD1Q8NHV4 660 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 MTA3Q9BTC8 594 aa22.69■■□□□ 1.22
GTF3C5-201ENST00000342018 PDIA3P30101 505 aaKnown RBP22.68■■□□□ 1.22
GTF3C5-201ENST00000342018 NBPF12Q5TAG4 269 aaPredicted RBP22.68■■□□□ 1.22
GTF3C5-201ENST00000342018 METTL16Q86W50 562 aaKnown RBP22.68■■□□□ 1.22
GTF3C5-201ENST00000342018 STX8Q9UNK0 236 aa22.68■■□□□ 1.22
GTF3C5-201ENST00000342018 SLC12A7Q9Y666 1083 aa22.68■■□□□ 1.22
GTF3C5-201ENST00000342018 NT5C2P49902 561 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 TATDN1Q6P1N9 297 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 CCDC144CPQ8IYA2 1237 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 ZNF526Q8TF50 670 aaPredicted RBP22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 POLR2AP24928 1970 aaKnown RBP22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 CUL4AQ13619 759 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 APOA5Q6Q788 366 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 DLK2Q6UY11 383 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 SYNE3Q6ZMZ3 975 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 SGMS1Q86VZ5 419 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 MICU3Q86XE3 530 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 CLEC10AQ8IUN9 316 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 TMTC2Q8N394 836 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 ZNF274Q96GC6 653 aaPredicted RBP22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 CEP95Q96GE4 821 aa22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 NCOA5Q9HCD5 579 aaKnown RBP22.67■■□□□ 1.22
GTF3C5-201ENST00000342018 ST3GAL1Q11201 340 aa22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 SULF1Q8IWU6 871 aa22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 CCDC17Q96LX7 622 aa22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 RRAGCQ9HB90 399 aa22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 TCP11L1Q9NUJ3 509 aa22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 PITPNM2Q9BZ72 1349 aa22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 SCN4AP35499 1836 aa22.66■■□□□ 1.22
GTF3C5-201ENST00000342018 ADM5C9JUS6 153 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 SCRN1Q12765 414 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 RRP1BQ14684 758 aaKnown RBP22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 NUP133Q8WUM0 1156 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 CLEC11AQ9Y240 323 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 WDR90Q96KV7 1748 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 ZBTB43O43298 467 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 PFKFB2O60825 505 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 EVCP57679 992 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 ABCB5Q2M3G0 1257 aa22.65■■□□□ 1.22
GTF3C5-201ENST00000342018 CCDC178Q5BJE1 867 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms