RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 HOXA7P31268 230 aaPredicted RBP15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 USP5P45974 858 aa15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 FXR1P51114 621 aaKnown RBP eCLIP15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 MAP3K12Q12852 859 aa15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 MTMR2Q13614 643 aa15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 RRP1BQ14684 758 aaKnown RBP15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 CCAR1Q8IX12 1150 aaKnown RBP15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 DEFB118Q96PH6 123 aa15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 DBNLQ9UJU6 430 aaKnown RBP15.92■□□□□ 0.14
NECTIN1-203ENST00000341398 UBE2Q1Q7Z7E8 422 aa15.91■□□□□ 0.14
NECTIN1-203ENST00000341398 ADGRA1Q86SQ6 560 aa15.91■□□□□ 0.14
NECTIN1-203ENST00000341398 GTF3C2Q8WUA4 911 aaPredicted RBP15.91■□□□□ 0.14
NECTIN1-203ENST00000341398 EAF2Q96CJ1 260 aaPredicted RBP15.91■□□□□ 0.14
NECTIN1-203ENST00000341398 PIH1D3Q9NQM4 214 aaKnown RBP15.91■□□□□ 0.14
NECTIN1-203ENST00000341398 SAP30BPQ9UHR5 308 aaKnown RBP15.91■□□□□ 0.14
NECTIN1-203ENST00000341398 HMGCRP04035 888 aa15.9■□□□□ 0.14
NECTIN1-203ENST00000341398 TTC6Q86TZ1 520 aa15.9■□□□□ 0.14
NECTIN1-203ENST00000341398 MAGEB6Q8N7X4 407 aa15.9■□□□□ 0.14
NECTIN1-203ENST00000341398 GPRC5AQ8NFJ5 357 aa15.9■□□□□ 0.14
NECTIN1-203ENST00000341398 MORF4L1Q9UBU8 362 aa15.9■□□□□ 0.14
NECTIN1-203ENST00000341398 EVI5O60447 810 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 GDF11O95390 407 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 RLBP1P12271 317 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 DYNLL1P63167 89 aaKnown RBP15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 TTF1Q15361 905 aaPredicted RBP15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L2Q6R6M4 530 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 AACSQ86V21 672 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 P2RX7Q99572 595 aaKnown RBP15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 HMX1Q9NP08 348 aaPredicted RBP15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 PAK6Q9NQU5 681 aaPredicted RBP15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 ZBTB21Q9ULJ3 1066 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 SIPA1L1O43166 1804 aa15.89■□□□□ 0.13
NECTIN1-203ENST00000341398 HERVK_113P62684 666 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 PDE3AQ14432 1141 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 NECAB2Q7Z6G3 386 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 TRMT44Q8IYL2 757 aaKnown RBP15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 MIER1Q8N108 512 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 NUDT12Q9BQG2 462 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 DNAJC18Q9H819 358 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 TLR7Q9NYK1 1049 aaKnown RBP15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 SERPINB13Q9UIV8 391 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 GJD2Q9UKL4 321 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 RPTORQ8N122 1335 aa15.88■□□□□ 0.13
NECTIN1-203ENST00000341398 MAPK4P31152 587 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 ANKLE1Q8NAG6 615 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 SOCS4Q8WXH5 440 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 FEZ1Q99689 392 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 CWC22Q9HCG8 908 aaKnown RBP15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 EXOC6BQ9Y2D4 811 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 HMMRO75330 724 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 GH2P01242 217 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 USP14P54578 494 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 CERKLQ49MI3 558 aaPredicted RBP15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 DIEXFQ68CQ4 756 aaKnown RBP15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 CLASRPQ8N2M8 674 aaKnown RBP15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 EHD4Q9H223 541 aa15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
NECTIN1-203ENST00000341398 POLR3DP05423 398 aaPredicted RBP15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 XRCC5P13010 732 aaKnown RBP15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 CYP2B6P20813 491 aa15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 JAG1P78504 1218 aa15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 TATDN1Q6P1N9 297 aa15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 RPAP2Q8IXW5 612 aaPredicted RBP15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 PAWRQ96IZ0 340 aaKnown RBP15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
NECTIN1-203ENST00000341398 TRIOBPQ9H2D6 2365 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 MAGEB6P1A0A0J9YX57 407 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L15C9J2P7 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L13C9JLJ4 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L11C9JVI0 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L18D6R9N7 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L22D6RA61 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L17D6RBQ6 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L19D6RCP7 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L20D6RJB6 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 GLRX3O76003 335 aaKnown RBP15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 ERVK-24P63145 666 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 CCNA1P78396 465 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 USP17L24Q0WX57 530 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 ABCB5Q2M3G0 1257 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 RHPN1Q8TCX5 695 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 PANK1Q8TE04 598 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 KIF1BPQ96EK5 621 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 PAGR1Q9BTK6 254 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 ANTXR1Q9H6X2 564 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 EMILIN3Q9NT22 766 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 RBM27Q9P2N5 1060 aaKnown RBP15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 RBPJLQ9UBG7 517 aa15.85■□□□□ 0.13
NECTIN1-203ENST00000341398 IFIT2P09913 472 aaKnown RBP15.84■□□□□ 0.13
NECTIN1-203ENST00000341398 SLC9C2Q5TAH2 1124 aa15.84■□□□□ 0.13
NECTIN1-203ENST00000341398 C12orf42Q96LP6 360 aa15.84■□□□□ 0.13
NECTIN1-203ENST00000341398 CRNKL1Q9BZJ0 848 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 232.2 ms