RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SPECC1Q5M775 1068 aa23.16■■□□□ 1.3
SPG7-202ENST00000341316 BPIFA3Q9BQP9 254 aa23.16■■□□□ 1.3
SPG7-202ENST00000341316 AATFQ9NY61 560 aaKnown RBP eCLIP23.16■■□□□ 1.3
SPG7-202ENST00000341316 ZRSR1Q15695 479 aaKnown RBP23.16■■□□□ 1.3
SPG7-202ENST00000341316 PDCL2Q8N4E4 241 aa23.16■■□□□ 1.3
SPG7-202ENST00000341316 ANKRD7Q92527 254 aa23.16■■□□□ 1.3
SPG7-202ENST00000341316 FOXP1Q9H334 677 aaPredicted RBP23.16■■□□□ 1.3
SPG7-202ENST00000341316 FUT2Q10981 343 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 ANKRD2Q9GZV1 360 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 PRDM4Q9UKN5 801 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 IRS2Q9Y4H2 1338 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 hCG_1642624A0A1W2PR95 340 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 PNOCQ13519 176 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 NCAPHQ15003 741 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 LONRF3Q496Y0 759 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 TUBE1Q9UJT0 475 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 USP21Q9UK80 565 aa23.15■■□□□ 1.3
SPG7-202ENST00000341316 PDS5AQ29RF7 1337 aaKnown RBP23.14■■□□□ 1.3
SPG7-202ENST00000341316 MYH2Q9UKX2 1941 aa23.14■■□□□ 1.29
SPG7-202ENST00000341316 PKN1Q16512 942 aa23.14■■□□□ 1.29
SPG7-202ENST00000341316 KRI1Q8N9T8 703 aaKnown RBP23.14■■□□□ 1.29
SPG7-202ENST00000341316 DCP1AQ9NPI6 582 aaPredicted RBP23.14■■□□□ 1.29
SPG7-202ENST00000341316 PCDHB6Q9Y5E3 794 aa23.14■■□□□ 1.29
SPG7-202ENST00000341316 PLEKHA8P1O95397 391 aa23.13■■□□□ 1.29
SPG7-202ENST00000341316 CYP2D6P10635 497 aa23.13■■□□□ 1.29
SPG7-202ENST00000341316 TNNT1P13805 278 aa23.13■■□□□ 1.29
SPG7-202ENST00000341316 CBX1P83916 185 aa23.13■■□□□ 1.29
SPG7-202ENST00000341316 IFIT1BQ5T764 474 aaKnown RBP23.13■■□□□ 1.29
SPG7-202ENST00000341316 METTL16Q86W50 562 aaKnown RBP23.13■■□□□ 1.29
SPG7-202ENST00000341316 LRRC8AQ8IWT6 810 aa23.13■■□□□ 1.29
SPG7-202ENST00000341316 RNF26Q9BY78 433 aaPredicted RBP23.13■■□□□ 1.29
SPG7-202ENST00000341316 KCNH3Q9ULD8 1083 aa23.13■■□□□ 1.29
SPG7-202ENST00000341316 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.13■■□□□ 1.29
SPG7-202ENST00000341316 TNRC6CQ9HCJ0 1690 aaKnown RBP23.13■■□□□ 1.29
SPG7-202ENST00000341316 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
SPG7-202ENST00000341316 FBXO2Q9UK22 296 aaPredicted RBP23.13■■□□□ 1.29
SPG7-202ENST00000341316 NMT2O60551 498 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 TROAPQ12815 778 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 VPS54Q9P1Q0 977 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 NHSQ6T4R5 1651 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 FAM205CA6NFA0 338 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 SMTNL1A8MU46 457 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 RILPL1Q5EBL4 403 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 FILIP1Q7Z7B0 1213 aa23.12■■□□□ 1.29
SPG7-202ENST00000341316 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 FOXN1O15353 648 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 KRBA2Q6ZNG9 492 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 CATIPQ7Z7H3 387 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 PTPREP23469 700 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 TPD52L1Q16890 204 aaPredicted RBP23.11■■□□□ 1.29
SPG7-202ENST00000341316 FAM47AQ5JRC9 791 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 IQCA1Q86XH1 822 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 HSD3B7Q9H2F3 369 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 CABP5Q9NP86 173 aa23.11■■□□□ 1.29
SPG7-202ENST00000341316 ATP2B1P20020 1258 aa23.1■■□□□ 1.29
SPG7-202ENST00000341316 PPP2R5BQ15173 497 aa23.1■■□□□ 1.29
SPG7-202ENST00000341316 EARS2Q5JPH6 523 aaKnown RBP23.1■■□□□ 1.29
SPG7-202ENST00000341316 CRNKL1Q9BZJ0 848 aaKnown RBP23.1■■□□□ 1.29
SPG7-202ENST00000341316 V9GY48 417 aaPredicted RBP23.1■■□□□ 1.29
SPG7-202ENST00000341316 MYH13Q9UKX3 1938 aa23.1■■□□□ 1.29
SPG7-202ENST00000341316 PCP11498 1178 aaKnown RBP23.09■■□□□ 1.29
SPG7-202ENST00000341316 NCBP1Q09161 790 aaKnown RBP23.09■■□□□ 1.29
SPG7-202ENST00000341316 CNNM3Q8NE01 707 aa23.09■■□□□ 1.29
SPG7-202ENST00000341316 XPO4Q9C0E2 1151 aaKnown RBP23.09■■□□□ 1.29
SPG7-202ENST00000341316 IFNKQ9P0W0 207 aa23.09■■□□□ 1.29
SPG7-202ENST00000341316 PRPF3O43395 683 aaKnown RBP23.08■■□□□ 1.29
SPG7-202ENST00000341316 ORC4O43929 436 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 RFC4P35249 363 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 MDM2Q00987 491 aaPredicted RBP23.08■■□□□ 1.29
SPG7-202ENST00000341316 NFIXQ14938 502 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 SLC4A8Q2Y0W8 1093 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 PHF20Q9BVI0 1012 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 NPHP1O15259 732 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 AKAP17AQ02040 695 aaKnown RBP23.08■■□□□ 1.29
SPG7-202ENST00000341316 ATP8A2Q9NTI2 1148 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 PCDHA5Q9Y5H7 936 aa23.08■■□□□ 1.29
SPG7-202ENST00000341316 SPDYE4A6NLX3 237 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 BMP6P22004 513 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 LMOD1P29536 600 aaPredicted RBP23.07■■□□□ 1.28
SPG7-202ENST00000341316 CCZ1BP86790 482 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 CCZ1P86791 482 aaPredicted RBP23.07■■□□□ 1.28
SPG7-202ENST00000341316 TRAPPC3LQ5T215 181 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 FAM196AQ6ZSG2 479 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 TMTC3Q6ZXV5 915 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 USP49Q70CQ1 688 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 TAF1LQ8IZX4 1826 aa23.07■■□□□ 1.28
SPG7-202ENST00000341316 DLEC1Q9Y238 1755 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 WNT7AO00755 349 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 SMC2O95347 1197 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 USP17L8P0C7I0 530 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 ATP1A3P13637 1013 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 GRIK5Q16478 980 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 NOM1Q5C9Z4 860 aaKnown RBP23.06■■□□□ 1.28
SPG7-202ENST00000341316 SRBD1Q8N5C6 995 aaKnown RBP23.06■■□□□ 1.28
SPG7-202ENST00000341316 GPR101Q96P66 508 aaPredicted RBP23.06■■□□□ 1.28
SPG7-202ENST00000341316 RBM28Q9NW13 759 aaKnown RBP23.06■■□□□ 1.28
SPG7-202ENST00000341316 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 PAXBP1Q9Y5B6 917 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 IKBKBO14920 756 aa23.06■■□□□ 1.28
SPG7-202ENST00000341316 ZSCAN20P17040 1043 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms