RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 AKR1B1P15121 316 aa15.74■□□□□ 0.11
TUBD1-202ENST00000340993 PTPRAP18433 802 aa15.74■□□□□ 0.11
TUBD1-202ENST00000340993 CAP2P40123 477 aa15.74■□□□□ 0.11
TUBD1-202ENST00000340993 MFAP1P55081 439 aaKnown RBP15.74■□□□□ 0.11
TUBD1-202ENST00000340993 ZYXQ15942 572 aaKnown RBP15.74■□□□□ 0.11
TUBD1-202ENST00000340993 CHMP4CQ96CF2 233 aa15.74■□□□□ 0.11
TUBD1-202ENST00000340993 MKNK2Q9HBH9 465 aa15.74■□□□□ 0.11
TUBD1-202ENST00000340993 SGSM2O43147 1006 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 ATP2B2Q01814 1243 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 GABPAQ06546 454 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 ABCB5Q2M3G0 1257 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 EHD4Q9H223 541 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 ZBTB21Q9ULJ3 1066 aa15.73■□□□□ 0.11
TUBD1-202ENST00000340993 MAP3K10Q02779 954 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 FAM47AQ5JRC9 791 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 C16orf86Q6ZW13 317 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 ERO1BQ86YB8 467 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 HHIPL1Q96JK4 782 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 PTPRFP10586 1907 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 SPDYE5A6NIY4 337 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 NOGQ13253 232 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 SEPT2Q15019 361 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 CASC1Q6TDU7 716 aa15.72■□□□□ 0.11
TUBD1-202ENST00000340993 LAMA4Q16363 1823 aa15.71■□□□□ 0.11
TUBD1-202ENST00000340993 RAD21O60216 631 aa15.71■□□□□ 0.11
TUBD1-202ENST00000340993 SPP2Q13103 211 aa15.71■□□□□ 0.11
TUBD1-202ENST00000340993 NOL9Q5SY16 702 aaKnown RBP15.71■□□□□ 0.11
TUBD1-202ENST00000340993 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.11
TUBD1-202ENST00000340993 METTL16Q86W50 562 aaKnown RBP15.71■□□□□ 0.11
TUBD1-202ENST00000340993 RAD50Q92878 1312 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 CCL15-CCL14A0A0B4J2E2 113 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 CCL15Q16663 113 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 GADL1Q6ZQY3 521 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 KIAA1211Q6ZU35 1233 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 NBPF3Q9H094 633 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 CABP5Q9NP86 173 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 SWAP70Q9UH65 585 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 USP17L5A8MUK1 530 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
TUBD1-202ENST00000340993 PPIL2Q13356 520 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 MTMR2Q13614 643 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 NKX2-3Q8TAU0 364 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 FEZ1Q99689 392 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 TAF6LQ9Y6J9 622 aa15.7■□□□□ 0.1
TUBD1-202ENST00000340993 MYH4Q9Y623 1939 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
TUBD1-202ENST00000340993 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
TUBD1-202ENST00000340993 ASNSP08243 561 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 ZBTB48P10074 688 aaPredicted RBP15.69■□□□□ 0.1
TUBD1-202ENST00000340993 RASA1P20936 1047 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 GUCY1A2P33402 732 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 HMGCS2P54868 508 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 PPATQ06203 517 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 ACER1Q8TDN7 264 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 DSCC1Q9BVC3 393 aa15.69■□□□□ 0.1
TUBD1-202ENST00000340993 NEDD4P46934 1319 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 ZNF213O14771 459 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 NMT2O60551 498 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 PDE4BQ07343 736 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 ALX1Q15699 326 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 TICAM2Q86XR7 235 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 ZNF444Q8N0Y2 327 aaPredicted RBP15.68■□□□□ 0.1
TUBD1-202ENST00000340993 BRI3BPQ8WY22 251 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 AFG3L2Q9Y4W6 797 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 RBM8AQ9Y5S9 174 aaKnown RBP15.68■□□□□ 0.1
TUBD1-202ENST00000340993 ROBO3Q96MS0 1386 aa15.68■□□□□ 0.1
TUBD1-202ENST00000340993 THSD7BQ9C0I4 1608 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 IGF2BP3O00425 579 aaKnown RBP eCLIP15.67■□□□□ 0.1
TUBD1-202ENST00000340993 TRPA1O75762 1119 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 SNAPC2Q13487 334 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 SAMD1Q6SPF0 538 aaPredicted RBP15.67■□□□□ 0.1
TUBD1-202ENST00000340993 ZNF280CQ8ND82 737 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 PTPN18Q99952 460 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 LSG1Q9H089 658 aaKnown RBP15.67■□□□□ 0.1
TUBD1-202ENST00000340993 TSPY2A6NKD2 308 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 HSPA1AP0DMV8 641 aaKnown RBP15.67■□□□□ 0.1
TUBD1-202ENST00000340993 HSPA1BP0DMV9 641 aaKnown RBP15.67■□□□□ 0.1
TUBD1-202ENST00000340993 GTF2A2P52657 109 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 TFAP4Q01664 338 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 ICA1Q05084 483 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 IMMTQ16891 758 aaKnown RBP15.67■□□□□ 0.1
TUBD1-202ENST00000340993 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 ZKSCAN3Q9BRR0 538 aa15.67■□□□□ 0.1
TUBD1-202ENST00000340993 MANSC4A6NHS7 340 aaPredicted RBP15.66■□□□□ 0.1
TUBD1-202ENST00000340993 TBC1D8O95759 1140 aa15.66■□□□□ 0.1
TUBD1-202ENST00000340993 MAP2K2P36507 400 aa15.66■□□□□ 0.1
TUBD1-202ENST00000340993 MFSD6Q6ZSS7 791 aa15.66■□□□□ 0.1
TUBD1-202ENST00000340993 SPICE1Q8N0Z3 855 aa15.66■□□□□ 0.1
TUBD1-202ENST00000340993 FAM43AQ8N2R8 423 aa15.66■□□□□ 0.1
TUBD1-202ENST00000340993 BEGAINQ9BUH8 593 aa15.66■□□□□ 0.1
TUBD1-202ENST00000340993 AS3MTQ9HBK9 375 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms