RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SHMT1P34896 483 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 CTCFP49711 727 aaPredicted RBP18.26■□□□□ 0.51
UBE3B-201ENST00000340074 SNAPC2Q13487 334 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 CCL15Q16663 113 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 MCMDC2Q4G0Z9 681 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 BRI3BPQ8WY22 251 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 PTPN18Q99952 460 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
UBE3B-201ENST00000340074 KCNH4Q9UQ05 1017 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 ASNSP08243 561 aa18.25■□□□□ 0.51
UBE3B-201ENST00000340074 HSPA8P11142 646 aaKnown RBP18.25■□□□□ 0.51
UBE3B-201ENST00000340074 CETPP11597 493 aa18.25■□□□□ 0.51
UBE3B-201ENST00000340074 TDO2P48775 406 aa18.25■□□□□ 0.51
UBE3B-201ENST00000340074 CERKLQ49MI3 558 aaPredicted RBP18.25■□□□□ 0.51
UBE3B-201ENST00000340074 IFNL3Q8IZI9 196 aa18.25■□□□□ 0.51
UBE3B-201ENST00000340074 SLC44A5Q8NCS7 719 aa18.25■□□□□ 0.51
UBE3B-201ENST00000340074 SAGE1Q9NXZ1 904 aa18.25■□□□□ 0.51
UBE3B-201ENST00000340074 AFG3L2Q9Y4W6 797 aa18.25■□□□□ 0.51
UBE3B-201ENST00000340074 MINDY4BA8MYZ0 360 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 FOXP2O15409 715 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 LBX1P52954 281 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 SBK1Q52WX2 424 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
UBE3B-201ENST00000340074 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
UBE3B-201ENST00000340074 NACAP1Q9BZK3 213 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 DIAPH3Q9NSV4 1193 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 ZBTB21Q9ULJ3 1066 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 LOC285556D6RIA3 1793 aa18.24■□□□□ 0.51
UBE3B-201ENST00000340074 TRIM75PA6NK02 468 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 HIP1O00291 1037 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 CXCL11O14625 94 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 SWAP70Q9UH65 585 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 ALDH1A1P00352 501 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 GH2P01242 217 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 CDK8P49336 464 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 ABCB5Q2M3G0 1257 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 OTUD7BQ6GQQ9 843 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 C16orf86Q6ZW13 317 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 NAPBQ9H115 298 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 GINM1Q9NU53 330 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
UBE3B-201ENST00000340074 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 A0A0G2JLL6 359 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-201ENST00000340074 TBC1D8O95759 1140 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 SPP2Q13103 211 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 MOGSQ13724 837 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 PRRT2Q7Z6L0 340 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-201ENST00000340074 STK11IPQ8N1F8 1099 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 ZNF280CQ8ND82 737 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 TBC1D2Q9BYX2 928 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
UBE3B-201ENST00000340074 ROBO3Q96MS0 1386 aa18.21■□□□□ 0.51
UBE3B-201ENST00000340074 GREB1LQ9C091 1923 aaPredicted RBP18.21■□□□□ 0.51
UBE3B-201ENST00000340074 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
UBE3B-201ENST00000340074 BTBD19C9JJ37 291 aa18.21■□□□□ 0.51
UBE3B-201ENST00000340074 AS3MTQ9HBK9 375 aa18.21■□□□□ 0.51
UBE3B-201ENST00000340074 CABP5Q9NP86 173 aa18.21■□□□□ 0.51
UBE3B-201ENST00000340074 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
UBE3B-201ENST00000340074 HSPD1P10809 573 aaKnown RBP18.2■□□□□ 0.5
UBE3B-201ENST00000340074 MFAP1P55081 439 aaKnown RBP18.2■□□□□ 0.5
UBE3B-201ENST00000340074 RAB3GAP1Q15042 981 aa18.2■□□□□ 0.5
UBE3B-201ENST00000340074 WDR18Q9BV38 432 aa18.2■□□□□ 0.5
UBE3B-201ENST00000340074 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
UBE3B-201ENST00000340074 MYH4Q9Y623 1939 aa18.19■□□□□ 0.5
UBE3B-201ENST00000340074 GUCY1A2P33402 732 aa18.19■□□□□ 0.5
UBE3B-201ENST00000340074 PPARAQ07869 468 aa18.19■□□□□ 0.5
UBE3B-201ENST00000340074 CRHR2Q13324 411 aa18.19■□□□□ 0.5
UBE3B-201ENST00000340074 GPAT2Q6NUI2 795 aa18.19■□□□□ 0.5
UBE3B-201ENST00000340074 GADL1Q6ZQY3 521 aa18.19■□□□□ 0.5
UBE3B-201ENST00000340074 FASTKD5Q7L8L6 764 aaKnown RBP18.19■□□□□ 0.5
UBE3B-201ENST00000340074 CFHR5Q9BXR6 569 aa18.19■□□□□ 0.5
UBE3B-201ENST00000340074 FGAP02671 866 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 AKR1B1P15121 316 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 CHMLP26374 656 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 DGKZQ13574 1117 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 MTMR2Q13614 643 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 SEPT2Q15019 361 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 ALX1Q15699 326 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 ANKRD23Q86SG2 305 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 IL25Q9H293 177 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
UBE3B-201ENST00000340074 PDHXO00330 501 aa18.17■□□□□ 0.5
UBE3B-201ENST00000340074 HMGCS2P54868 508 aa18.17■□□□□ 0.5
UBE3B-201ENST00000340074 BACE1P56817 501 aa18.17■□□□□ 0.5
UBE3B-201ENST00000340074 TAF1CQ15572 869 aaPredicted RBP18.17■□□□□ 0.5
UBE3B-201ENST00000340074 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
UBE3B-201ENST00000340074 CCDC17Q96LX7 622 aa18.17■□□□□ 0.5
UBE3B-201ENST00000340074 MKNK2Q9HBH9 465 aa18.17■□□□□ 0.5
UBE3B-201ENST00000340074 ZCCHC17Q9NP64 241 aaKnown RBP18.17■□□□□ 0.5
UBE3B-201ENST00000340074 USP17L10C9JJH3 530 aa18.16■□□□□ 0.5
UBE3B-201ENST00000340074 RASA1P20936 1047 aa18.16■□□□□ 0.5
UBE3B-201ENST00000340074 BMP2KLQ5H9B9 411 aa18.16■□□□□ 0.5
UBE3B-201ENST00000340074 PRDM1O75626 825 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 SLC3A2P08195 630 aaKnown RBP18.15■□□□□ 0.5
UBE3B-201ENST00000340074 CTDSPL2Q05D32 466 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 SH3D19Q5HYK7 790 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms