RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 ZNF496Q96IT1 587 aaPredicted RBP10.49□□□□□ -0.73
RPGR-202ENST00000339363 CCDC85AQ96PX6 553 aaPredicted RBP10.49□□□□□ -0.73
RPGR-202ENST00000339363 ZNF202O95125 648 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 MARCKSP29966 332 aaPredicted RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 MATR3P43243 847 aaKnown RBP eCLIP10.48□□□□□ -0.73
RPGR-202ENST00000339363 CCNHP51946 323 aaPredicted RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 MYL5Q02045 173 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 PDCLQ13371 301 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 ARMC3Q5W041 872 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 RIC3Q7Z5B4 369 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 STAG1Q8WVM7 1258 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 PUS3Q9BZE2 481 aaKnown RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 YIPF3Q9GZM5 350 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 SF3B2Q13435 895 aaKnown RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 LONRF3Q496Y0 759 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 HSP90AB4PQ58FF6 505 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 SPECC1Q5M775 1068 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 UTYO14607 1347 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 RBM5P52756 815 aaKnown RBP eCLIP10.48□□□□□ -0.73
RPGR-202ENST00000339363 EXOSC10Q01780 885 aaKnown RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 SCARF1Q14162 830 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 NBPF9Q3BBW0 867 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 FOXP4Q8IVH2 680 aaPredicted RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 NAPGQ99747 312 aaPredicted RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 ANKZF1Q9H8Y5 726 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 ETAA1Q9NY74 926 aa10.48□□□□□ -0.73
RPGR-202ENST00000339363 G3BP2Q9UN86 482 aaKnown RBP10.48□□□□□ -0.73
RPGR-202ENST00000339363 E7EWF7 191 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 KCNJ6P48051 423 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 TUBB4BP68371 445 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 AKAP4Q5JQC9 854 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 MSL1Q68DK7 614 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 KCTD16Q68DU8 428 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 SND1Q7KZF4 910 aaKnown RBP eCLIP10.47□□□□□ -0.73
RPGR-202ENST00000339363 GSPT2Q8IYD1 628 aaKnown RBP10.47□□□□□ -0.73
RPGR-202ENST00000339363 HNRNPLLQ8WVV9 542 aaKnown RBP10.47□□□□□ -0.73
RPGR-202ENST00000339363 THOC1Q96FV9 657 aaKnown RBP10.47□□□□□ -0.73
RPGR-202ENST00000339363 INTS13Q9NVM9 706 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 C5P01031 1676 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 NFAT5O94916 1531 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 PFKFB2O60825 505 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 BMP6P22004 513 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
RPGR-202ENST00000339363 SLC35F6Q8N357 371 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 OPA1O60313 960 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 RWDD2BP57060 319 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 NCAPH2Q6IBW4 605 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 FCHSD1Q86WN1 690 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 OSBP2Q969R2 916 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 SEC31BQ9NQW1 1179 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 HPS5Q9UPZ3 1129 aa10.47□□□□□ -0.73
RPGR-202ENST00000339363 ADGRL3Q9HAR2 1447 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 HSPD1P10809 573 aaKnown RBP10.46□□□□□ -0.73
RPGR-202ENST00000339363 NLRP12P59046 1061 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 GRIN1Q05586 938 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 PDE4BQ07343 736 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 SF3A3Q12874 501 aaKnown RBP eCLIP10.46□□□□□ -0.73
RPGR-202ENST00000339363 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
RPGR-202ENST00000339363 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 NEUROD6Q96NK8 337 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 KCND1Q9NSA2 647 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 GUCA1BQ9UMX6 200 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 CARMIL3Q8ND23 1372 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 TMCO5BA8MYB1 307 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 MEFVO15553 781 aaPredicted RBP10.46□□□□□ -0.73
RPGR-202ENST00000339363 HSF2BPO75031 334 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 ODF2Q5BJF6 829 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 ESCO1Q5FWF5 840 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 KLHL10Q6JEL2 608 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 CDC5LQ99459 802 aaKnown RBP10.46□□□□□ -0.73
RPGR-202ENST00000339363 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
RPGR-202ENST00000339363 STX10O60499 249 aa10.46□□□□□ -0.74
RPGR-202ENST00000339363 ATP5JP18859 108 aa10.46□□□□□ -0.74
RPGR-202ENST00000339363 ZC3H6P61129 1189 aaKnown RBP10.46□□□□□ -0.74
RPGR-202ENST00000339363 PNMA8AQ86V59 439 aaPredicted RBP10.46□□□□□ -0.74
RPGR-202ENST00000339363 ALDH8A1Q9H2A2 487 aaPredicted RBP10.46□□□□□ -0.74
RPGR-202ENST00000339363 MCM8Q9UJA3 840 aa10.46□□□□□ -0.74
RPGR-202ENST00000339363 MAST3O60307 1309 aa10.46□□□□□ -0.74
RPGR-202ENST00000339363 EIF4E1BA6NMX2 242 aaKnown RBP10.45□□□□□ -0.74
RPGR-202ENST00000339363 ABL1P00519 1130 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 MTF1Q14872 753 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 MCMDC2Q4G0Z9 681 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 LMBR1LQ6UX01 489 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 CCDC50Q8IVM0 306 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 SYNE4Q8N205 404 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 PARD3BQ8TEW8 1205 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 FAXDC2Q96IV6 333 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 DDX21Q9NR30 783 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPGR-202ENST00000339363 SOWAHDA6NJG2 315 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 ADORA1P30542 326 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 ANTXR2P58335 489 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 PNOCQ13519 176 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 SNX1Q13596 522 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 ANKRD24Q8TF21 1146 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 MED15Q96RN5 788 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 MYH15Q9Y2K3 1946 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 ABCC6O95255 1503 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 E7EVH7 732 aa10.45□□□□□ -0.74
RPGR-202ENST00000339363 COBLO75128 1261 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms