RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 RAD17O75943 681 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
LRP1-202ENST00000338962 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 TNMDQ9H2S6 317 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 PSMD14O00487 310 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 IGSF3O75054 1194 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 POLR3DP05423 398 aaPredicted RBP12.86□□□□□ -0.35
LRP1-202ENST00000338962 NTRK3Q16288 839 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 CAMK4Q16566 473 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 GMLQ99445 158 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 GJB4Q9NTQ9 266 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 SUGT1Q9Y2Z0 365 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 MAST2Q6P0Q8 1798 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 CCDC196A0A1B0GTZ2 297 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 USP17L21D6R901 530 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
LRP1-202ENST00000338962 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 ME1P48163 572 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 RCAN1P53805 252 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 NID2Q14112 1375 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 TRIM29Q14134 588 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 RTN1Q16799 776 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
LRP1-202ENST00000338962 GPC2Q8N158 579 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 ATP8A2Q9NTI2 1148 aa12.86□□□□□ -0.35
LRP1-202ENST00000338962 TNKSO95271 1327 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 STK36Q9NRP7 1315 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
LRP1-202ENST00000338962 NR1I2O75469 434 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 KIF23Q02241 960 aaPredicted RBP12.85□□□□□ -0.35
LRP1-202ENST00000338962 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 IQCA1Q86XH1 822 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 CERS5Q8N5B7 392 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 AGBL3Q8NEM8 1001 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
LRP1-202ENST00000338962 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
LRP1-202ENST00000338962 SBF1O95248 1867 aa12.85□□□□□ -0.35
LRP1-202ENST00000338962 MYO3BQ8WXR4 1341 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 BAZ2AQ9UIF9 1905 aaKnown RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 GLTPD2A6NH11 291 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 ESPNB1AK53 854 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 SLC3A2P08195 630 aaKnown RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 IFNAR1P17181 557 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 RPS12P25398 132 aaKnown RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 GNL2Q13823 731 aaKnown RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 MYSM1Q5VVJ2 828 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 TRIM22Q8IYM9 498 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 WASF1Q92558 559 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 DPF2Q92785 391 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 AIFM3Q96NN9 605 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 CLSTN2Q9H4D0 955 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 MMP14P50281 582 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 SF3A1Q15459 793 aaKnown RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 KRT40Q6A162 431 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 CCDC73Q6ZRK6 1079 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 NAP1L5Q96NT1 182 aaPredicted RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
LRP1-202ENST00000338962 POLR3EQ9NVU0 708 aa12.84□□□□□ -0.35
LRP1-202ENST00000338962 PRDM1O75626 825 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 GSTO1P78417 241 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 STK38Q15208 465 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 KCNG4Q8TDN1 519 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 FGRP09769 529 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 YY1P25490 414 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 SEC23AQ15436 765 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 IFIT1BQ5T764 474 aaKnown RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 CKAP2LQ8IYA6 745 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 ENAHQ8N8S7 591 aaPredicted RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 FANCBQ8NB91 859 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 NOL10Q9BSC4 688 aaKnown RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 MXD3Q9BW11 206 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 MRIQ9BWK5 157 aa12.83□□□□□ -0.36
LRP1-202ENST00000338962 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
LRP1-202ENST00000338962 YEATS4O95619 227 aa12.82□□□□□ -0.36
LRP1-202ENST00000338962 BAG3O95817 575 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms