RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ZNF444Q8N0Y2 327 aaPredicted RBP18.88■□□□□ 0.61
HPS1-202ENST00000338546 TTLL6Q8N841 843 aa18.88■□□□□ 0.61
HPS1-202ENST00000338546 TEKT1Q969V4 418 aa18.88■□□□□ 0.61
HPS1-202ENST00000338546 SLC26A6Q9BXS9 759 aa18.88■□□□□ 0.61
HPS1-202ENST00000338546 VPS33BQ9H267 617 aa18.88■□□□□ 0.61
HPS1-202ENST00000338546 GRPEL1Q9HAV7 217 aa18.88■□□□□ 0.61
HPS1-202ENST00000338546 RBM27Q9P2N5 1060 aaKnown RBP18.88■□□□□ 0.61
HPS1-202ENST00000338546 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
HPS1-202ENST00000338546 TFAP4Q01664 338 aa18.87■□□□□ 0.61
HPS1-202ENST00000338546 KIF23Q02241 960 aaPredicted RBP18.87■□□□□ 0.61
HPS1-202ENST00000338546 KRT40Q6A162 431 aa18.87■□□□□ 0.61
HPS1-202ENST00000338546 NUP133Q8WUM0 1156 aa18.87■□□□□ 0.61
HPS1-202ENST00000338546 PHKBQ93100 1093 aa18.87■□□□□ 0.61
HPS1-202ENST00000338546 FBXW7Q969H0 707 aa18.87■□□□□ 0.61
HPS1-202ENST00000338546 RTEL1Q9NZ71 1219 aa18.87■□□□□ 0.61
HPS1-202ENST00000338546 ECE2O60344 883 aa18.86■□□□□ 0.61
HPS1-202ENST00000338546 GUCY1B3Q02153 619 aa18.86■□□□□ 0.61
HPS1-202ENST00000338546 GAS2L3Q86XJ1 694 aa18.86■□□□□ 0.61
HPS1-202ENST00000338546 KIF13BQ9NQT8 1826 aa18.86■□□□□ 0.61
HPS1-202ENST00000338546 MYH1P12882 1939 aa18.86■□□□□ 0.61
HPS1-202ENST00000338546 USP17L3A6NCW0 530 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 USP17L4A6NCW7 530 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 PRPF3O43395 683 aaKnown RBP18.85■□□□□ 0.61
HPS1-202ENST00000338546 U2AF2P26368 475 aaKnown RBP eCLIP18.85■□□□□ 0.61
HPS1-202ENST00000338546 PLCD1P51178 756 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 DACT2Q5SW24 774 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 USP17L1Q7RTZ2 530 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 CTCFLQ8NI51 663 aaPredicted RBP18.85■□□□□ 0.61
HPS1-202ENST00000338546 ZDHHC15Q96MV8 337 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 PSMD1Q99460 953 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 POLR3EQ9NVU0 708 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 PPFIA3O75145 1194 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 NPM3O75607 178 aaKnown RBP18.85■□□□□ 0.61
HPS1-202ENST00000338546 YEATS4O95619 227 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 XRCC6P12956 609 aaKnown RBP eCLIP18.85■□□□□ 0.61
HPS1-202ENST00000338546 XBP1P17861 261 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 KIF5BP33176 963 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 FOSBP53539 338 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 AKAP17AQ02040 695 aaKnown RBP18.85■□□□□ 0.61
HPS1-202ENST00000338546 SAFBQ15424 915 aaKnown RBP eCLIP18.85■□□□□ 0.61
HPS1-202ENST00000338546 CCDC93Q567U6 631 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 FAM47AQ5JRC9 791 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 MYSM1Q5VVJ2 828 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 RCSD1Q6JBY9 416 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 USP28Q96RU2 1077 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 DBNDD1Q9H9R9 158 aa18.85■□□□□ 0.61
HPS1-202ENST00000338546 MYO3BQ8WXR4 1341 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 TSPY3P0CV98 308 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 TSPY8P0CW00 308 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 CDK8P49336 464 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 EVX2Q03828 476 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 FUT2Q10981 343 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 TMTC3Q6ZXV5 915 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 NEDD1Q8NHV4 660 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 DYNLL2Q96FJ2 89 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 KAT14Q9H8E8 782 aa18.84■□□□□ 0.61
HPS1-202ENST00000338546 ECM29Q5VYK3 1845 aa18.83■□□□□ 0.61
HPS1-202ENST00000338546 SYCE3A1L190 88 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 WDHD1O75717 1129 aaPredicted RBP18.83■□□□□ 0.6
HPS1-202ENST00000338546 RASA1P20936 1047 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 CRKP46108 304 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 NASPP49321 788 aaPredicted RBP18.83■□□□□ 0.6
HPS1-202ENST00000338546 GNAQP50148 359 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 TGFB2P61812 414 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 APOBEC3HQ6NTF7 200 aaKnown RBP18.83■□□□□ 0.6
HPS1-202ENST00000338546 KCNG4Q8TDN1 519 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 PDGFDQ9GZP0 370 aaPredicted RBP18.83■□□□□ 0.6
HPS1-202ENST00000338546 IL17RBQ9NRM6 502 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 DDX19AQ9NUU7 478 aaKnown RBP18.83■□□□□ 0.6
HPS1-202ENST00000338546 USP40Q9NVE5 1235 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 SWAP70Q9UH65 585 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 SAP30BPQ9UHR5 308 aaKnown RBP18.83■□□□□ 0.6
HPS1-202ENST00000338546 SERPINA10Q9UK55 444 aa18.83■□□□□ 0.6
HPS1-202ENST00000338546 ZNF646O15015 1829 aaPredicted RBP18.82■□□□□ 0.6
HPS1-202ENST00000338546 MMP1P03956 469 aa18.82■□□□□ 0.6
HPS1-202ENST00000338546 NOVP48745 357 aa18.82■□□□□ 0.6
HPS1-202ENST00000338546 FOXP1Q9H334 677 aaPredicted RBP18.82■□□□□ 0.6
HPS1-202ENST00000338546 PLIN4Q96Q06 1357 aa18.82■□□□□ 0.6
HPS1-202ENST00000338546 F8W031 263 aaPredicted RBP18.81■□□□□ 0.6
HPS1-202ENST00000338546 GABPAQ06546 454 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 CDC42EP5Q6NZY7 148 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 PGBD1Q96JS3 809 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 AIFM3Q96NN9 605 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 C21orf2O43822 256 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 NMT2O60551 498 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 KCNA3P22001 575 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 GNL2Q13823 731 aaKnown RBP18.81■□□□□ 0.6
HPS1-202ENST00000338546 FAM177A1Q8N128 213 aaPredicted RBP18.81■□□□□ 0.6
HPS1-202ENST00000338546 LINC00301Q8NCQ3 95 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 LZTS2Q9BRK4 669 aa18.81■□□□□ 0.6
HPS1-202ENST00000338546 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.81■□□□□ 0.6
HPS1-202ENST00000338546 MYH6P13533 1939 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 SCN9AQ15858 1988 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 A0A1W2PQ27 194 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 A0A1W2PQ64 194 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 A0A1W2PQD8 194 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 KIF28PB7ZC32 967 aa18.8■□□□□ 0.6
HPS1-202ENST00000338546 PPIP5K2O43314 1243 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms