RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 DNM1Q05193 864 aaKnown RBP12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 ZDHHC15Q96MV8 337 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 ALG1Q9BT22 464 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 SLC26A6Q9BXS9 759 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 SCAND2PQ9GZW5 306 aaPredicted RBP12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 KAT14Q9H8E8 782 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 KCNA3P22001 575 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 CDC27P30260 824 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 SERPINA10Q9UK55 444 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 CFAP45Q9UL16 551 aa12.66□□□□□ -0.38
MS4A4A-201ENST00000337908 PSME4Q14997 1843 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 MYH15Q9Y2K3 1946 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 PPFIA3O75145 1194 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 IFNAR1P17181 557 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 KIF5BP33176 963 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 CDK8P49336 464 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 GUCY1B3Q02153 619 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 RESTQ13127 1097 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 CDC42EP5Q6NZY7 148 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 DGKHQ86XP1 1220 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 CD2APQ9Y5K6 639 aa12.65□□□□□ -0.38
MS4A4A-201ENST00000337908 SCN9AQ15858 1988 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 DEXIO95424 95 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 XBP1P17861 261 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 PLCD1P51178 756 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 UBE2HP62256 183 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 SAFBQ15424 915 aaKnown RBP eCLIP12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 ATL3Q6DD88 541 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 PHKBQ93100 1093 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 CHAMP1Q96JM3 812 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 SPATA32Q96LK8 384 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 GDPD2Q9HCC8 539 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 MYH8P13535 1937 aa12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
MS4A4A-201ENST00000337908 TCHHQ07283 1943 aa12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 DEKP35659 375 aaKnown RBP12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 CRACR2BQ8N4Y2 399 aaPredicted RBP12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 OGFOD1Q8N543 542 aa12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 FBXO18Q8NFZ0 1043 aa12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 JDP2Q8WYK2 163 aa12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 TAOK3Q9H2K8 898 aa12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
MS4A4A-201ENST00000337908 WDHD1O75717 1129 aaPredicted RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 RASA1P20936 1047 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 GNAQP50148 359 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 EVX2Q03828 476 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 APOBEC3HQ6NTF7 200 aaKnown RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 CAVIN1Q6NZI2 390 aaKnown RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 RNF26Q9BY78 433 aaPredicted RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 ZNRF3Q9ULT6 936 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 MYH6P13533 1939 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 NMT2O60551 498 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 RAD17O75943 681 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 NTRK3Q16288 839 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 CFAP100Q494V2 611 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 NEDD1Q8NHV4 660 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 ELP1O95163 1332 aa12.62□□□□□ -0.39
MS4A4A-201ENST00000337908 L1TD1Q5T7N2 865 aaKnown RBP12.61□□□□□ -0.39
MS4A4A-201ENST00000337908 KRT40Q6A162 431 aa12.61□□□□□ -0.39
MS4A4A-201ENST00000337908 CCDC82Q8N4S0 544 aa12.61□□□□□ -0.39
MS4A4A-201ENST00000337908 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
MS4A4A-201ENST00000337908 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms