RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.72■□□□□ 0.91
CHGA-202ENST00000334654 TBC1D32Q96NH3 1257 aa20.72■□□□□ 0.91
CHGA-202ENST00000334654 KIF2CQ99661 725 aa20.72■□□□□ 0.91
CHGA-202ENST00000334654 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHGA-202ENST00000334654 GBA2Q9HCG7 927 aaPredicted RBP20.72■□□□□ 0.91
CHGA-202ENST00000334654 ANGEL1Q9UNK9 670 aaKnown RBP20.72■□□□□ 0.91
CHGA-202ENST00000334654 B4E1Z4 1266 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 CTNND1O60716 968 aaKnown RBP20.71■□□□□ 0.91
CHGA-202ENST00000334654 GDF11O95390 407 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 GUCY1A2P33402 732 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 ANAPC15P60006 121 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 FAM47AQ5JRC9 791 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 LDLRAD1Q5T700 205 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 MB21D2Q8IYB1 491 aaPredicted RBP20.71■□□□□ 0.91
CHGA-202ENST00000334654 ZKSCAN4Q969J2 545 aaPredicted RBP20.71■□□□□ 0.91
CHGA-202ENST00000334654 CCDC17Q96LX7 622 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 WRNIP1Q96S55 665 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 CNNM2Q9H8M5 875 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 ZNF287Q9HBT7 754 aa20.71■□□□□ 0.91
CHGA-202ENST00000334654 UBE2Q2LH0YL09 131 aa20.7■□□□□ 0.9
CHGA-202ENST00000334654 FKBP1BP68106 108 aa20.7■□□□□ 0.9
CHGA-202ENST00000334654 MAP3K9P80192 1104 aa20.7■□□□□ 0.9
CHGA-202ENST00000334654 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
CHGA-202ENST00000334654 CYB5R4Q7L1T6 521 aa20.7■□□□□ 0.9
CHGA-202ENST00000334654 ZNF444Q8N0Y2 327 aaPredicted RBP20.7■□□□□ 0.9
CHGA-202ENST00000334654 NCOA7Q8NI08 942 aa20.7■□□□□ 0.9
CHGA-202ENST00000334654 ZSWIM5Q9P217 1185 aa20.7■□□□□ 0.9
CHGA-202ENST00000334654 DOCK1Q14185 1865 aa20.7■□□□□ 0.9
CHGA-202ENST00000334654 RANBP6O60518 1105 aaKnown RBP20.69■□□□□ 0.9
CHGA-202ENST00000334654 KDM4AO75164 1064 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 IREB2P48200 963 aaKnown RBP20.69■□□□□ 0.9
CHGA-202ENST00000334654 TFAP4Q01664 338 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 KRT32Q14532 448 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 NOL9Q5SY16 702 aaKnown RBP20.69■□□□□ 0.9
CHGA-202ENST00000334654 ARMC9Q7Z3E5 817 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 NEDD1Q8NHV4 660 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 NEK1Q96PY6 1258 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 KRT23Q9C075 422 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 TOMM22Q9NS69 142 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 PLIN4Q96Q06 1357 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 IGKV6D-41A0A0C4DH26 115 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 GH2P01242 217 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 ANTXR2P58335 489 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 ABCB5Q2M3G0 1257 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 ESR2Q92731 530 aa20.69■□□□□ 0.9
CHGA-202ENST00000334654 UPF2Q9HAU5 1272 aaKnown RBP20.69■□□□□ 0.9
CHGA-202ENST00000334654 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.69■□□□□ 0.9
CHGA-202ENST00000334654 PHIPQ8WWQ0 1821 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 VGLL4Q14135 290 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 TTLL12Q14166 644 aaPredicted RBP20.68■□□□□ 0.9
CHGA-202ENST00000334654 SCYL3Q8IZE3 742 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 C2orf69Q8N8R5 385 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 CLMNQ96JQ2 1002 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
CHGA-202ENST00000334654 TM6SF1Q9BZW5 370 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 ZBTB21Q9ULJ3 1066 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 SNCAIPQ9Y6H5 919 aa20.68■□□□□ 0.9
CHGA-202ENST00000334654 CPA1P15085 419 aa20.67■□□□□ 0.9
CHGA-202ENST00000334654 NT5C2P49902 561 aa20.67■□□□□ 0.9
CHGA-202ENST00000334654 EXOSC10Q01780 885 aaKnown RBP20.67■□□□□ 0.9
CHGA-202ENST00000334654 TRDNQ13061 729 aa20.67■□□□□ 0.9
CHGA-202ENST00000334654 SIAH1Q8IUQ4 282 aa20.67■□□□□ 0.9
CHGA-202ENST00000334654 ANKRD13AQ8IZ07 590 aa20.67■□□□□ 0.9
CHGA-202ENST00000334654 ZSWIM6Q9HCJ5 1215 aa20.67■□□□□ 0.9
CHGA-202ENST00000334654 UNCXA6NJT0 531 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 TSPY2A6NKD2 308 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 NMT2O60551 498 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 TSPY3P0CV98 308 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 TSPY8P0CW00 308 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 NOVP48745 357 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 SEPT2Q15019 361 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 TMEM179Q6ZVK1 233 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 CHST3Q7LGC8 479 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
CHGA-202ENST00000334654 GINM1Q9NU53 330 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 TCP11L1Q9NUJ3 509 aa20.66■□□□□ 0.9
CHGA-202ENST00000334654 MPHOSPH10O00566 681 aaKnown RBP20.65■□□□□ 0.9
CHGA-202ENST00000334654 ASNSP08243 561 aa20.65■□□□□ 0.9
CHGA-202ENST00000334654 PTPRAP18433 802 aa20.65■□□□□ 0.9
CHGA-202ENST00000334654 SAPCD2Q86UD0 394 aa20.65■□□□□ 0.9
CHGA-202ENST00000334654 CCDC84Q86UT8 332 aaPredicted RBP20.65■□□□□ 0.9
CHGA-202ENST00000334654 CLEC10AQ8IUN9 316 aa20.65■□□□□ 0.9
CHGA-202ENST00000334654 TMEM88BA6NKF7 163 aa20.64■□□□□ 0.89
CHGA-202ENST00000334654 CASTP20810 708 aaKnown RBP20.64■□□□□ 0.89
CHGA-202ENST00000334654 PSMA5P28066 241 aa20.64■□□□□ 0.89
CHGA-202ENST00000334654 RCSD1Q6JBY9 416 aa20.64■□□□□ 0.89
CHGA-202ENST00000334654 DHX32Q7L7V1 743 aaKnown RBP20.64■□□□□ 0.89
CHGA-202ENST00000334654 ZKSCAN3Q9BRR0 538 aa20.64■□□□□ 0.89
CHGA-202ENST00000334654 CABP5Q9NP86 173 aa20.64■□□□□ 0.89
CHGA-202ENST00000334654 MCM5P33992 734 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 SEC23AQ15436 765 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 RUFY3Q7L099 469 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 IGDCC4Q8TDY8 1250 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 CEP95Q96GE4 821 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 TCEANC2Q96MN5 208 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 UPF3BQ9BZI7 483 aaKnown RBP20.63■□□□□ 0.89
CHGA-202ENST00000334654 MTMR4Q9NYA4 1195 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 CSADQ9Y600 493 aa20.63■□□□□ 0.89
CHGA-202ENST00000334654 TLL2Q9Y6L7 1015 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms