RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 Q6ZUG5 572 aa12.21□□□□□ -0.45
AP1S3-201ENST00000334271 DPH6Q7L8W6 267 aa12.21□□□□□ -0.45
AP1S3-201ENST00000334271 SGMS1Q86VZ5 419 aa12.21□□□□□ -0.45
AP1S3-201ENST00000334271 EPB41L4AQ9HCS5 686 aaPredicted RBP12.21□□□□□ -0.45
AP1S3-201ENST00000334271 SMC3Q9UQE7 1217 aa12.21□□□□□ -0.45
AP1S3-201ENST00000334271 DDX60LQ5H9U9 1706 aaKnown RBP12.21□□□□□ -0.46
AP1S3-201ENST00000334271 PRDX5P30044 214 aa12.21□□□□□ -0.46
AP1S3-201ENST00000334271 PPARAQ07869 468 aa12.21□□□□□ -0.46
AP1S3-201ENST00000334271 ZNF384Q8TF68 577 aa12.21□□□□□ -0.46
AP1S3-201ENST00000334271 ESR2Q92731 530 aa12.21□□□□□ -0.46
AP1S3-201ENST00000334271 GTF3C6Q969F1 213 aa12.21□□□□□ -0.46
AP1S3-201ENST00000334271 POM121Q96HA1 1249 aa12.21□□□□□ -0.46
AP1S3-201ENST00000334271 IQSEC3Q9UPP2 1182 aaPredicted RBP12.21□□□□□ -0.46
AP1S3-201ENST00000334271 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
AP1S3-201ENST00000334271 WTIPA6NIX2 430 aaPredicted RBP12.2□□□□□ -0.46
AP1S3-201ENST00000334271 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
AP1S3-201ENST00000334271 SLFNL1Q499Z3 407 aa12.2□□□□□ -0.46
AP1S3-201ENST00000334271 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
AP1S3-201ENST00000334271 PLSCR2Q9NRY7 297 aa12.2□□□□□ -0.46
AP1S3-201ENST00000334271 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
AP1S3-201ENST00000334271 TPCN1Q9ULQ1 816 aa12.2□□□□□ -0.46
AP1S3-201ENST00000334271 ANGEL1Q9UNK9 670 aaKnown RBP12.2□□□□□ -0.46
AP1S3-201ENST00000334271 CTDP1Q9Y5B0 961 aaPredicted RBP12.2□□□□□ -0.46
AP1S3-201ENST00000334271 LTBP3Q9NS15 1303 aa12.2□□□□□ -0.46
AP1S3-201ENST00000334271 CARNS1A5YM72 827 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 PRC1O43663 620 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 ME3Q16798 604 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 TTLL5Q6EMB2 1281 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 ADGRA1Q86SQ6 560 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 DCP1AQ9NPI6 582 aaPredicted RBP12.19□□□□□ -0.46
AP1S3-201ENST00000334271 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
AP1S3-201ENST00000334271 MRVI1Q9Y6F6 885 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 COL2A1P02458 1487 aaPredicted RBP12.19□□□□□ -0.46
AP1S3-201ENST00000334271 PDE4BQ07343 736 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 LARGE2Q8N3Y3 721 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 BORCS6Q96GS4 357 aa12.19□□□□□ -0.46
AP1S3-201ENST00000334271 ERICH2A1L162 156 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 CDKL5O76039 1030 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 KCNA3P22001 575 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
AP1S3-201ENST00000334271 FAM43AQ8N2R8 423 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 CDK5RAP2Q96SN8 1893 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 ARFGEF1Q9Y6D6 1849 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 SKOR2Q2VWA4 1001 aaPredicted RBP12.18□□□□□ -0.46
AP1S3-201ENST00000334271 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
AP1S3-201ENST00000334271 TBC1D10CQ8IV04 446 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 SMARCC2Q8TAQ2 1214 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
AP1S3-201ENST00000334271 ECM29Q5VYK3 1845 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 CCDC196A0A1B0GTZ2 297 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 SH2B2O14492 632 aaPredicted RBP12.17□□□□□ -0.46
AP1S3-201ENST00000334271 CALM1P0DP23 149 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 CALM2P0DP24 149 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 CALM3P0DP25 149 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 CHRNA5P30532 468 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 GTF2IP78347 998 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 BRF1Q92994 677 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 TEKT1Q969V4 418 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 ZDHHC15Q96MV8 337 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 TCP11L1Q9NUJ3 509 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 AATFQ9NY61 560 aaKnown RBP eCLIP12.17□□□□□ -0.46
AP1S3-201ENST00000334271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
AP1S3-201ENST00000334271 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 USP5P45974 858 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 SYNE3Q6ZMZ3 975 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 IQCA1Q86XH1 822 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 RNF217Q8TC41 542 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 SNRNP27Q8WVK2 155 aaKnown RBP12.17□□□□□ -0.46
AP1S3-201ENST00000334271 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
AP1S3-201ENST00000334271 ECE2O60344 883 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 FAM200BP0CF97 657 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 DPEP1P16444 411 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 PDIA3P30101 505 aaKnown RBP12.16□□□□□ -0.46
AP1S3-201ENST00000334271 SATB1Q01826 763 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 MCM6Q14566 821 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
AP1S3-201ENST00000334271 DACT2Q5SW24 774 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 IGDCC4Q8TDY8 1250 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 ANKS1AQ92625 1134 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 SENP7Q9BQF6 1050 aa12.16□□□□□ -0.46
AP1S3-201ENST00000334271 CCDC189A1A4V9 331 aa12.15□□□□□ -0.46
AP1S3-201ENST00000334271 PRKAB2O43741 272 aa12.15□□□□□ -0.46
AP1S3-201ENST00000334271 CPA1P15085 419 aa12.15□□□□□ -0.46
AP1S3-201ENST00000334271 MCM4P33991 863 aa12.15□□□□□ -0.46
AP1S3-201ENST00000334271 BTDP43251 543 aa12.15□□□□□ -0.46
AP1S3-201ENST00000334271 ANTXR2P58335 489 aa12.15□□□□□ -0.46
AP1S3-201ENST00000334271 HAND2P61296 217 aa12.15□□□□□ -0.46
AP1S3-201ENST00000334271 DYNLL1P63167 89 aaKnown RBP12.15□□□□□ -0.46
AP1S3-201ENST00000334271 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms