RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CLASP2O75122 1294 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 DAB2IPQ5VWQ8 1189 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 SMAPO00193 183 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 MMEP08473 750 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 TMOD1P28289 359 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 HDAC4P56524 1084 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 PKD2Q13563 968 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 CATSPER3Q86XQ3 398 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 PASD1Q8IV76 773 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATP11CQ8NB49 1132 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 MSANTD3Q96H12 275 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 KLHL18O94889 574 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 POTEJP0CG39 1038 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ACTN1P12814 892 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 XBP1P17861 261 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 TRAPPC10P48553 1259 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 VAV2P52735 878 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 EFR3AQ14156 821 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 SNX32Q86XE0 403 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 TERB1Q8NA31 727 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 RHOBTB2Q9BYZ6 727 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 BRD8Q9H0E9 1235 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ELP1O95163 1332 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 AKNAQ7Z591 1439 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 PRDM2Q13029 1718 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 GOLGA8SH3BPF8 625 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 ASS1P00966 412 aaKnown RBP6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 RAPH1Q70E73 1250 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 TXNDC2Q86VQ3 553 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATP6V0A4Q9HBG4 840 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 MID2Q9UJV3 735 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 HSPA8P11142 646 aaKnown RBP6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 CCNCP24863 283 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 FKBP5Q13451 457 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 CDC37Q16543 378 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 MCTP1Q6DN14 999 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 NFRKBQ6P4R8 1299 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 SYNE3Q6ZMZ3 975 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 NGDNQ8NEJ9 315 aaKnown RBP6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 CLUAP1Q96AJ1 413 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 H7C0S8 307 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 AREL1O15033 823 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 RGS20O76081 388 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 FGFR1OPO95684 399 aaKnown RBP6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 LARP1BQ659C4 914 aaKnown RBP6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 DCAF11Q8TEB1 546 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 EDEM3Q9BZQ6 932 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 TRPC6Q9Y210 931 aa6.71□□□□□ -1.33
CDC42BPA-201ENST00000334218 TROQ12816 1431 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 XPAP23025 273 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 FCHO2Q0JRZ9 810 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 LRRC8BQ6P9F7 803 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRIM42Q8IWZ5 723 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 POLR3CQ9BUI4 534 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 KIF9Q9HAQ2 790 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 ETAA1Q9NY74 926 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 VPS18Q9P253 973 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 TOM1L1O75674 476 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 CUL1Q13616 776 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC125Q86Z20 511 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 PEX5LQ8IYB4 626 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 SNRNP27Q8WVK2 155 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 AGTPBP1Q9UPW5 1226 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZNF652Q9Y2D9 606 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 RPSAP08865 295 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 CLEC4MQ9H2X3 399 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 A0A1W2PRG0 241 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 SULT1B1O43704 296 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 DMPKQ09013 629 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 DGKKQ5KSL6 1271 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 NECAB1Q8N987 351 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 FSIP1Q8NA03 581 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 FAM25AB3EWG3 89 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 FAM25CB3EWG5 89 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 FAM25GB3EWG6 89 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 POLR2DO15514 142 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 TNNI2P48788 182 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 LRMPQ12912 555 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 TP53BP2Q13625 1128 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRIM58Q8NG06 486 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCSER2Q9H7U1 834 aa6.71□□□□□ -1.34
CDC42BPA-201ENST00000334218 NDUFAB1O14561 156 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 AP3D1O14617 1153 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 HGSO14964 777 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ATP2A1O14983 1001 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 THAP12O43422 761 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRIM27P14373 513 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 DCTN2Q13561 401 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANKRD20A4Q4UJ75 823 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANKRD20A8PQ5CZ79 823 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANKRD20A2Q5SQ80 823 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANKRD20A1Q5TYW2 823 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 HDDC2Q7Z4H3 204 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 BLOC1S5Q8TDH9 187 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 HOMER3Q9NSC5 361 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 RABL2BQ9UNT1 228 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 PHF8Q9UPP1 1060 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANKRD12Q6UB98 2062 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 DAPK3O43293 454 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms