RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 PSD3Q9NYI0 1048 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 BIN2Q9UBW5 565 aaPredicted RBP13.41□□□□□ -0.26
LIMK2-202ENST00000333611 MROH7-TTC4A0A0A0MT08 1334 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 COBLO75128 1261 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 FAM71BQ8TC56 605 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 MICAL1Q8TDZ2 1067 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 MIEF2Q96C03 454 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 KIF9Q9HAQ2 790 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 EYA2O00167 538 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 PHKG2P15735 406 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
LIMK2-202ENST00000333611 STX17P56962 302 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 MYL5Q02045 173 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 SWT1Q5T5J6 900 aaKnown RBP13.41□□□□□ -0.26
LIMK2-202ENST00000333611 RBM28Q9NW13 759 aaKnown RBP13.41□□□□□ -0.26
LIMK2-202ENST00000333611 UTYO14607 1347 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
LIMK2-202ENST00000333611 CCDC189A1A4V9 331 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 GPAA1O43292 621 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 EZRP15311 586 aaKnown RBP13.4□□□□□ -0.26
LIMK2-202ENST00000333611 KCTD16Q68DU8 428 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 ATG9AQ7Z3C6 839 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 XAGE2Q96GT9 111 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 GSCP56915 257 aaPredicted RBP13.4□□□□□ -0.26
LIMK2-202ENST00000333611 KRT40Q6A162 431 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 KCNV1Q6PIU1 500 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 KAT14Q9H8E8 782 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 SENP2Q9HC62 589 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 KIF23Q02241 960 aaPredicted RBP13.4□□□□□ -0.26
LIMK2-202ENST00000333611 MTF1Q14872 753 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 METTL24Q5JXM2 366 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 CCDC181Q5TID7 509 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 HELBQ8NG08 1087 aaPredicted RBP13.4□□□□□ -0.26
LIMK2-202ENST00000333611 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
LIMK2-202ENST00000333611 GBP3Q9H0R5 595 aa13.4□□□□□ -0.26
LIMK2-202ENST00000333611 OSBPL5Q9H0X9 879 aaPredicted RBP13.4□□□□□ -0.26
LIMK2-202ENST00000333611 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 KCNJ14Q9UNX9 436 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 SH3BP1Q9Y3L3 701 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 PCDHA5Q9Y5H7 936 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 NALCNQ8IZF0 1738 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 SNX1Q13596 522 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 CCDC102BQ68D86 513 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
LIMK2-202ENST00000333611 SPATS2LQ9NUQ6 558 aaKnown RBP13.39□□□□□ -0.27
LIMK2-202ENST00000333611 LRRIQ3A6PVS8 624 aaPredicted RBP13.38□□□□□ -0.27
LIMK2-202ENST00000333611 CBFA2T2O43439 604 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 YEATS4O95619 227 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
LIMK2-202ENST00000333611 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
LIMK2-202ENST00000333611 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 SPDL1Q96EA4 605 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 CNNM1Q9NRU3 951 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 A0A1W2PQ27 194 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 A0A1W2PQ64 194 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 A0A1W2PQD8 194 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 AFMP43652 599 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 PDCLQ13371 301 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 STIM1Q13586 685 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 TRIM65Q6PJ69 517 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 GOLGA6L7A0A1B0GV03 622 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 FANCGO15287 622 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 CCNHP51946 323 aaPredicted RBP13.38□□□□□ -0.27
LIMK2-202ENST00000333611 BEND6Q5SZJ8 279 aaPredicted RBP13.38□□□□□ -0.27
LIMK2-202ENST00000333611 NCAPH2Q6IBW4 605 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 CEP112Q8N8E3 955 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 NFE2L3Q9Y4A8 694 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 MRFAP1Q9Y605 127 aa13.38□□□□□ -0.27
LIMK2-202ENST00000333611 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 VWA3AA6NCI4 1184 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 CYP27B1O15528 508 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 FOXO4P98177 505 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 NCAPHQ15003 741 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 TMEM67Q5HYA8 995 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 BRAPQ7Z569 592 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 SRGAP1Q7Z6B7 1085 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 TEX11Q8IYF3 940 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 STAMQ92783 540 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 KCNH3Q9ULD8 1083 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 CMA1P23946 247 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 IFT88Q13099 833 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 IQUBQ8NA54 791 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 CCDC148Q8NFR7 591 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 CAPS2Q9BXY5 557 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 YIPF3Q9GZM5 350 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 NBPF26B4DH59 902 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 IFIT3O14879 490 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms