RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 FOXP4Q8IVH2 680 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CSRNP2Q9H175 543 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 TPM1P09493 284 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 SPECC1LQ69YQ0 1117 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 TMEM232C9JQI7 657 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GRAMD1CQ8IYS0 662 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GRIN1Q05586 938 aa13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GOLGA8FQ08AF8 430 aa13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GOLGA8DPQ0D2H9 430 aa13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ZNF771Q7L3S4 317 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ENOX1Q8TC92 643 aaKnown RBP13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GNG11P61952 73 aa13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ERCC6LQ2NKX8 1250 aa13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 SRRTQ9BXP5 876 aaKnown RBP13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 RASSF8Q8NHQ8 419 aa13.34□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CAMTA2O94983 1202 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PDE4BQ07343 736 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CASQ1P31415 396 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 NLRP5P59047 1200 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 DMTNQ08495 405 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ARHGAP29Q52LW3 1261 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ANKRD20A12PQ8NF67 263 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 FERMT2Q96AC1 680 aa13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MYH7P12883 1935 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 STX10O60499 249 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 NTSR2O95665 410 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ADKP55263 362 aaKnown RBP13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ZNF174Q15697 407 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 FBXO38Q6PIJ6 1188 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CRNKL1Q9BZJ0 848 aaKnown RBP13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 HSD3B7Q9H2F3 369 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PPP2R2CQ9Y2T4 447 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 USP17L12C9JPN9 530 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 USP17L21D6R901 530 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ERCC5P28715 1186 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PLCD1P51178 756 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 STX17P56962 302 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ZHX1Q9UKY1 873 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TACC3Q9Y6A5 838 aa13.32□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CYP2D7A0A087X1C5 515 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 VWA3AA6NCI4 1184 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PCP11498 1178 aaKnown RBP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TXLNAP40222 546 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CPLX3Q8WVH0 158 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 AKAP11Q9UKA4 1901 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MORC3Q14149 939 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 EPSTI1Q96J88 318 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 CTAGE1Q96RT6 745 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SAMSN1Q9NSI8 373 aaKnown RBP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SLFN14P0C7P3 912 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 BMP6P22004 513 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 MDM2Q00987 491 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 BMS1Q14692 1282 aaKnown RBP13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TTC38Q5R3I4 469 aa13.31□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TMCO3Q6UWJ1 677 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ADGRA1Q86SQ6 560 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 BRIP1Q9BX63 1249 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TMX1Q9H3N1 280 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 AKR1B15C9JRZ8 316 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 IGSF3O75054 1194 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 KIF5BP33176 963 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 IQUBQ8NA54 791 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 LRP6O75581 1613 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 SEC23AQ15436 765 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
CSPG4P4Y-201ENST00000333235 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms