RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 CCDC151A5D8V7 595 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 BMP15O95972 392 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 RHOXF2BP0C7M4 288 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 CTAGE8P0CG41 777 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 CCT6AP40227 531 aaKnown RBP9.9□□□□□ -0.82
LIMK2-201ENST00000331728 RRAGBQ5VZM2 374 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 CTAGE6Q86UF2 777 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 CTAGE4Q8IX94 777 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 LPIN2Q92539 896 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 ESR2Q92731 530 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 RHOXF2Q9BQY4 288 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 FUT8Q9BYC5 575 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 LY9Q9HBG7 655 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 ZSWIM5Q9P217 1185 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 PDE8BO95263 885 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 PRR29P0C7W0 189 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 GNAT2P19087 354 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 PTPREP23469 700 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 KRT2P35908 639 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 IGHMBP2P38935 993 aaKnown RBP9.9□□□□□ -0.82
LIMK2-201ENST00000331728 LIFRP42702 1097 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 TMEM139Q8IV31 216 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 SPATA5Q8NB90 893 aa9.9□□□□□ -0.82
LIMK2-201ENST00000331728 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.9□□□□□ -0.82
LIMK2-201ENST00000331728 KAT6BQ8WYB5 2073 aa9.9□□□□□ -0.83
LIMK2-201ENST00000331728 CYP7A1P22680 504 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 IQCA1Q86XH1 822 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 ZNF654Q8IZM8 581 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 SYNE4Q8N205 404 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 CSRNP2Q9H175 543 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 FOXP1Q9H334 677 aaPredicted RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 MAGEC2Q9UBF1 373 aaPredicted RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 ADAM21Q9UKJ8 722 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 IQSEC3Q9UPP2 1182 aaPredicted RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 CTNND2Q9UQB3 1225 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 PCDHB6Q9Y5E3 794 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 C1orf167Q5SNV9 1468 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 STK36Q9NRP7 1315 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 GYS2P54840 703 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 FMR1Q06787 632 aaKnown RBP eCLIP9.89□□□□□ -0.833e-12■■■■■ 43.2
LIMK2-201ENST00000331728 SPAG1Q07617 926 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 CCDC70Q6NSX1 233 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 C10orf67Q8IYJ2 551 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 STRBPQ96SI9 672 aaKnown RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 NAA15Q9BXJ9 866 aaKnown RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 PSD3Q9NYI0 1048 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 VPS54Q9P1Q0 977 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 VPS18Q9P253 973 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 FER1L4A9Z1Z3 1794 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 RTL9Q8NET4 1388 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 ERCC5P28715 1186 aaPredicted RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 ZNF174Q15697 407 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 SGMS1Q86VZ5 419 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 CTCFLQ8NI51 663 aaPredicted RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 STAMQ92783 540 aa9.89□□□□□ -0.83
LIMK2-201ENST00000331728 CCDC47Q96A33 483 aaKnown RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 GNL3LQ9NVN8 582 aaKnown RBP9.89□□□□□ -0.83
LIMK2-201ENST00000331728 hCG_1642624A0A1W2PR95 340 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 PDE8AO60658 829 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 TBX2Q13207 712 aaPredicted RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 IFIT1BQ5T764 474 aaKnown RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 SPATA1Q5VX52 437 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 TTF2Q9UNY4 1162 aaKnown RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 UBE2Q2LH0YL09 131 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 MYO1CO00159 1063 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 NLRP5P59047 1200 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 STIM1Q13586 685 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 GIGYF2Q6Y7W6 1299 aaKnown RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 HDXQ7Z353 690 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 SRGAP1Q7Z6B7 1085 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 KIAA1328Q86T90 577 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 TC2NQ8N9U0 490 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 KIFC2Q96AC6 838 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 MAP3K14Q99558 947 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 NAPGQ99747 312 aaPredicted RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 VPS16Q9H269 839 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 INTS13Q9NVM9 706 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 SLIT3O75094 1523 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 MAP3K15Q6ZN16 1313 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 GUCY1A2P33402 732 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 ACTN2P35609 894 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 RBL2Q08999 1139 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 IGDCC4Q8TDY8 1250 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 ZNHIT6Q9NWK9 470 aaKnown RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 RSPH14Q9UHP6 348 aa9.88□□□□□ -0.83
LIMK2-201ENST00000331728 SRPRBQ9Y5M8 271 aaKnown RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 AFDNP55196 1824 aaKnown RBP9.88□□□□□ -0.83
LIMK2-201ENST00000331728 PRKAB2O43741 272 aa9.87□□□□□ -0.83
LIMK2-201ENST00000331728 IVLP07476 585 aa9.87□□□□□ -0.83
LIMK2-201ENST00000331728 PIP4K2BP78356 416 aa9.87□□□□□ -0.83
LIMK2-201ENST00000331728 GRIN1Q05586 938 aa9.87□□□□□ -0.83
LIMK2-201ENST00000331728 MTF1Q14872 753 aa9.87□□□□□ -0.83
LIMK2-201ENST00000331728 SMYD4Q8IYR2 804 aaPredicted RBP9.87□□□□□ -0.83
LIMK2-201ENST00000331728 CDC23Q9UJX2 597 aa9.87□□□□□ -0.83
LIMK2-201ENST00000331728 FBXO2Q9UK22 296 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms