RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 AMPD2Q01433 879 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 STK38Q15208 465 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 PARP10Q53GL7 1025 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 SPECC1LQ69YQ0 1117 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 PROSER2Q86WR7 435 aaPredicted RBP10.07□□□□□ -0.8
CPNE8-201ENST00000331366 C1orf131Q8NDD1 294 aaKnown RBP10.07□□□□□ -0.8
CPNE8-201ENST00000331366 FTOQ9C0B1 505 aaKnown RBP eCLIP10.07□□□□□ -0.8
CPNE8-201ENST00000331366 HNRNPH3P31942 346 aaKnown RBP10.07□□□□□ -0.8
CPNE8-201ENST00000331366 ME1P48163 572 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 ATP2C1P98194 919 aaPredicted RBP10.07□□□□□ -0.8
CPNE8-201ENST00000331366 SF3A1Q15459 793 aaKnown RBP10.07□□□□□ -0.8
CPNE8-201ENST00000331366 PKN1Q16512 942 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 MEA1Q16626 185 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 SPATA1Q5VX52 437 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 CCDC102BQ68D86 513 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 SPC24Q8NBT2 197 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 SHISA4Q96DD7 197 aa10.07□□□□□ -0.8
CPNE8-201ENST00000331366 C16orf45Q96MC5 204 aaPredicted RBP10.07□□□□□ -0.8
CPNE8-201ENST00000331366 ZBTB7CA1YPR0 619 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 PNMA6AP0CW24 399 aaPredicted RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 MYL6BP14649 208 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 ADORA1P30542 326 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 METAP2P50579 478 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 CCDC57Q2TAC2 916 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 DNAJC2Q99543 621 aaKnown RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 IFNKQ9P0W0 207 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 KCNH3Q9ULD8 1083 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 PPP2R2CQ9Y2T4 447 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 A0A1W2PQJ5 194 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 TARSL2A2RTX5 802 aaKnown RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 CHGBP05060 677 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 PRPHP41219 470 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 PPP1R2P41236 205 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 CLCN6P51797 869 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 POSTNQ15063 836 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 GALNT17Q6IS24 598 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 C4orf32Q8N8J7 132 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 TCEANC2Q96MN5 208 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 ALG1Q9BT22 464 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 PUS3Q9BZE2 481 aaKnown RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 BECN2A8MW95 431 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 MCCD1P59942 119 aaPredicted RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
CPNE8-201ENST00000331366 TSPYL1Q9H0U9 437 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 ZNF536O15090 1300 aa10.06□□□□□ -0.8
CPNE8-201ENST00000331366 A0A1B0GVL5 298 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 ZBTB43O43298 467 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 TBC1D8O95759 1140 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 TIMM10P62072 90 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 SF3B3Q15393 1217 aaKnown RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 PDXDC2PQ6P474 469 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 IFNL3Q8IZI9 196 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 IPO4Q8TEX9 1081 aaKnown RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 CDC5LQ99459 802 aaKnown RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 RIOK1Q9BRS2 568 aaKnown RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 CUEDC2Q9H467 287 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 NCOA5Q9HCD5 579 aaKnown RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 RWDD2AQ9UIY3 292 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 ANKRD18BA2A2Z9 1011 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 LAD1O00515 517 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 ATF3P18847 181 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 DNTTIP2Q5QJE6 756 aaKnown RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 NKX2-3Q8TAU0 364 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 EXOC4Q96A65 974 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 SRRM3A6NNA2 597 aaPredicted RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 PRLRP16471 622 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 STK3Q13188 491 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 CC2D1AQ6P1N0 951 aaPredicted RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 KIF6Q6ZMV9 814 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 NOC3LQ8WTT2 800 aaKnown RBP10.05□□□□□ -0.8
CPNE8-201ENST00000331366 RPGRIP1Q96KN7 1286 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 TTYH3Q9C0H2 523 aa10.05□□□□□ -0.8
CPNE8-201ENST00000331366 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
CPNE8-201ENST00000331366 WHAMMP3Q1A5X7 153 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 LONRF3Q496Y0 759 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 PSMD14O00487 310 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 PDE4BQ07343 736 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 CLEC4GQ6UXB4 293 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 ZSCAN29Q8IWY8 852 aaPredicted RBP10.04□□□□□ -0.8
CPNE8-201ENST00000331366 ZC3H3Q8IXZ2 948 aaKnown RBP10.04□□□□□ -0.8
CPNE8-201ENST00000331366 DPF2Q92785 391 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 FUT8Q9BYC5 575 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 RAI14Q9P0K7 980 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 TTF2Q9UNY4 1162 aaKnown RBP10.04□□□□□ -0.8
CPNE8-201ENST00000331366 CNTNAP5Q8WYK1 1306 aa10.04□□□□□ -0.8
CPNE8-201ENST00000331366 SPAG1Q07617 926 aa10.03□□□□□ -0.8
CPNE8-201ENST00000331366 SSRP1Q08945 709 aaKnown RBP10.03□□□□□ -0.8
CPNE8-201ENST00000331366 CERS3Q8IU89 383 aa10.03□□□□□ -0.8
CPNE8-201ENST00000331366 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms