RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ERVK-24P63145 666 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 Q3C1V9 767 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 C1orf53Q5VUE5 145 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 RBPJLQ9UBG7 517 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 ATAD5Q96QE3 1844 aa18.58■□□□□ 0.57
CTHRC1-201ENST00000330295 HOXA7P31268 230 aaPredicted RBP18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 FPGSQ05932 587 aa18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 METTL24Q5JXM2 366 aa18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 VGLL2Q8N8G2 317 aa18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 EDC3Q96F86 508 aaKnown RBP18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 OSBPL5Q9H0X9 879 aaPredicted RBP18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 C11orf16Q9NQ32 467 aa18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 TACC3Q9Y6A5 838 aa18.58■□□□□ 0.56
CTHRC1-201ENST00000330295 CACNA1AO00555 2505 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 KIF16BQ96L93 1317 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 XIRP2A4UGR9 3374 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 PDE8BO95263 885 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 PBX2P40425 430 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 TFF2Q03403 129 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 TLE2Q04725 743 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 AAK1Q2M2I8 961 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 PBX4Q9BYU1 374 aa18.57■□□□□ 0.56
CTHRC1-201ENST00000330295 GRM8O00222 908 aa18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 TBC1D12O60347 775 aa18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 LDHBP07195 334 aaKnown RBP18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 CLTBP09497 229 aa18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 RAG1P15918 1043 aa18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 KCNQ1P51787 676 aa18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 LRRC24Q50LG9 513 aa18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 TRPV1Q8NER1 839 aa18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 CWC22Q9HCG8 908 aaKnown RBP18.56■□□□□ 0.56
CTHRC1-201ENST00000330295 FAM86C2PA6NEL3 165 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 FAM196BA6NMK8 535 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 USP17L5A8MUK1 530 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 KIAA0355O15063 1070 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 ADCYAP1R1P41586 468 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 BEND3Q5T5X7 828 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 CCDC129Q6ZRS4 1044 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 PAGR1Q9BTK6 254 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 DDX4Q9NQI0 724 aaKnown RBP18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 MYH2Q9UKX2 1941 aa18.55■□□□□ 0.56
CTHRC1-201ENST00000330295 IFIT1P09914 478 aaKnown RBP18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 CYBAP13498 195 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 CYP2C19P33261 490 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 PICALMQ13492 652 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 FERMT2Q96AC1 680 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 TMOD4Q9NZQ9 345 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 CHD9Q3L8U1 2897 aa18.54■□□□□ 0.56
CTHRC1-201ENST00000330295 GLRX3O76003 335 aaKnown RBP18.53■□□□□ 0.56
CTHRC1-201ENST00000330295 MYCNP04198 464 aaPredicted RBP18.53■□□□□ 0.56
CTHRC1-201ENST00000330295 MTMR2Q13614 643 aa18.53■□□□□ 0.56
CTHRC1-201ENST00000330295 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
CTHRC1-201ENST00000330295 GTF3C2Q8WUA4 911 aaPredicted RBP18.53■□□□□ 0.56
CTHRC1-201ENST00000330295 CACNA1FO60840 1977 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 GRXCR1A8MXD5 290 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 HOXC6P09630 235 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 FGFR2P21802 821 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 CAP2P40123 477 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 BACE1P56817 501 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 ANO1Q5XXA6 986 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 NDUFB9Q9Y6M9 179 aa18.52■□□□□ 0.56
CTHRC1-201ENST00000330295 GAKO14976 1311 aa18.51■□□□□ 0.55
CTHRC1-201ENST00000330295 SLC15A5A6NIM6 579 aa18.51■□□□□ 0.55
CTHRC1-201ENST00000330295 F6X3S4 739 aa18.51■□□□□ 0.55
CTHRC1-201ENST00000330295 PUM3Q15397 648 aaKnown RBP18.51■□□□□ 0.55
CTHRC1-201ENST00000330295 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
CTHRC1-201ENST00000330295 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.51■□□□□ 0.55
CTHRC1-201ENST00000330295 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
CTHRC1-201ENST00000330295 PTPREP23469 700 aa18.5■□□□□ 0.55
CTHRC1-201ENST00000330295 RRP1BQ14684 758 aaKnown RBP18.5■□□□□ 0.55
CTHRC1-201ENST00000330295 NPLOC4Q8TAT6 608 aa18.5■□□□□ 0.55
CTHRC1-201ENST00000330295 KHSRPQ92945 711 aaKnown RBP eCLIP18.5■□□□□ 0.55
CTHRC1-201ENST00000330295 WDR18Q9BV38 432 aa18.5■□□□□ 0.55
CTHRC1-201ENST00000330295 SALL1Q9NSC2 1324 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 REV3LO60673 3130 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 SMIM22K7EJ46 135 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 APAF1O14727 1248 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 ERC2O15083 957 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 IGHA2P01877 340 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 LRRC41Q15345 812 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 WDR78Q5VTH9 848 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 MICALL1Q8N3F8 863 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 SUCLG2Q96I99 432 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 TMEM39AQ9NV64 488 aa18.49■□□□□ 0.55
CTHRC1-201ENST00000330295 SEPT4O43236 478 aa18.48■□□□□ 0.55
CTHRC1-201ENST00000330295 PQBP1O60828 265 aaKnown RBP18.48■□□□□ 0.55
CTHRC1-201ENST00000330295 CCNA1P78396 465 aa18.48■□□□□ 0.55
CTHRC1-201ENST00000330295 RASIP1Q5U651 963 aa18.48■□□□□ 0.55
CTHRC1-201ENST00000330295 PRKRIP1Q9H875 184 aaPredicted RBP18.48■□□□□ 0.55
CTHRC1-201ENST00000330295 MSRAQ9UJ68 235 aa18.48■□□□□ 0.55
CTHRC1-201ENST00000330295 LRRC37A2A6NM11 1700 aa18.48■□□□□ 0.55
CTHRC1-201ENST00000330295 C19orf81C9J6K1 198 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms