RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 PRRT2Q7Z6L0 340 aaPredicted RBP17.76■□□□□ 0.43
CLRN1-203ENST00000328863 AFG3L2Q9Y4W6 797 aa17.76■□□□□ 0.43
CLRN1-203ENST00000328863 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
CLRN1-203ENST00000328863 TRIM75PA6NK02 468 aa17.75■□□□□ 0.43
CLRN1-203ENST00000328863 GABPAQ06546 454 aa17.75■□□□□ 0.43
CLRN1-203ENST00000328863 CERKLQ49MI3 558 aaPredicted RBP17.75■□□□□ 0.43
CLRN1-203ENST00000328863 FASTKD5Q7L8L6 764 aaKnown RBP17.75■□□□□ 0.43
CLRN1-203ENST00000328863 ZNF280CQ8ND82 737 aa17.75■□□□□ 0.43
CLRN1-203ENST00000328863 HELLSQ9NRZ9 838 aa17.75■□□□□ 0.43
CLRN1-203ENST00000328863 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.75■□□□□ 0.43
CLRN1-203ENST00000328863 LAMA4Q16363 1823 aa17.75■□□□□ 0.43
CLRN1-203ENST00000328863 USP17L12C9JPN9 530 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 USP17L21D6R901 530 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 HIP1O00291 1037 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 APPP05067 770 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 CYP2D6P10635 497 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 PDE4AP27815 886 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 SHMT1P34896 483 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 CRHR2Q13324 411 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 RRP1BQ14684 758 aaKnown RBP17.74■□□□□ 0.43
CLRN1-203ENST00000328863 C12orf60Q5U649 245 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 ANKRD23Q86SG2 305 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 CCDC84Q86UT8 332 aaPredicted RBP17.74■□□□□ 0.43
CLRN1-203ENST00000328863 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 SEC62Q99442 399 aaKnown RBP17.74■□□□□ 0.43
CLRN1-203ENST00000328863 PARK7Q99497 189 aaKnown RBP17.74■□□□□ 0.43
CLRN1-203ENST00000328863 PTPN18Q99952 460 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 ZFYVE28Q9HCC9 887 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
CLRN1-203ENST00000328863 CABP5Q9NP86 173 aa17.74■□□□□ 0.43
CLRN1-203ENST00000328863 GREB1LQ9C091 1923 aaPredicted RBP17.73■□□□□ 0.43
CLRN1-203ENST00000328863 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 BTBD19C9JJ37 291 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 GH2P01242 217 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 ABCB5Q2M3G0 1257 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 TTC22Q5TAA0 569 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 GADL1Q6ZQY3 521 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 NAPBQ9H115 298 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 DIAPH3Q9NSV4 1193 aa17.73■□□□□ 0.43
CLRN1-203ENST00000328863 GPR25O00155 361 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
CLRN1-203ENST00000328863 SPP2Q13103 211 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 COL13A1Q5TAT6 717 aaPredicted RBP17.72■□□□□ 0.43
CLRN1-203ENST00000328863 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 PROCA1Q8NCQ7 364 aaPredicted RBP17.72■□□□□ 0.43
CLRN1-203ENST00000328863 FEZ1Q99689 392 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 WDR18Q9BV38 432 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 CCDC171Q6TFL3 1326 aa17.72■□□□□ 0.43
CLRN1-203ENST00000328863 CYP2D7A0A087X1C5 515 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 A0A0D9SFI3 127 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
CLRN1-203ENST00000328863 PDHXO00330 501 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 MPHOSPH10O00566 681 aaKnown RBP17.71■□□□□ 0.43
CLRN1-203ENST00000328863 NMIQ13287 307 aaPredicted RBP17.71■□□□□ 0.43
CLRN1-203ENST00000328863 MTMR2Q13614 643 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 MCMDC2Q4G0Z9 681 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 CCDC129Q6ZRS4 1044 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 TMEM179Q6ZVK1 233 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 ZNF296Q8WUU4 475 aaPredicted RBP17.71■□□□□ 0.43
CLRN1-203ENST00000328863 CCDC136Q96JN2 1154 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 ZNF287Q9HBT7 754 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 TMOD4Q9NZQ9 345 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 PNMA3Q9UL41 463 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 AGTPBP1Q9UPW5 1226 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 SLC45A1Q9Y2W3 748 aa17.71■□□□□ 0.43
CLRN1-203ENST00000328863 MINDY4BA8MYZ0 360 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 FKTNO75072 461 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
CLRN1-203ENST00000328863 SDSP20132 328 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 EVX2Q03828 476 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 PABPC4Q13310 644 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLRN1-203ENST00000328863 MOGSQ13724 837 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 TNS4Q8IZW8 715 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 DYNLL2Q96FJ2 89 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 CCDC17Q96LX7 622 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
CLRN1-203ENST00000328863 C19orf81C9J6K1 198 aa17.69■□□□□ 0.42
CLRN1-203ENST00000328863 USP17L10C9JJH3 530 aa17.69■□□□□ 0.42
CLRN1-203ENST00000328863 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
CLRN1-203ENST00000328863 HMGCS2P54868 508 aa17.69■□□□□ 0.42
CLRN1-203ENST00000328863 BACE1P56817 501 aa17.69■□□□□ 0.42
CLRN1-203ENST00000328863 SHROOM1Q2M3G4 852 aaPredicted RBP17.69■□□□□ 0.42
CLRN1-203ENST00000328863 ZMYM6O95789 1325 aa17.69■□□□□ 0.42
CLRN1-203ENST00000328863 TLR2O60603 784 aa17.68■□□□□ 0.42
CLRN1-203ENST00000328863 CDK8P49336 464 aa17.68■□□□□ 0.42
CLRN1-203ENST00000328863 USP14P54578 494 aa17.68■□□□□ 0.42
CLRN1-203ENST00000328863 JAG1P78504 1218 aa17.68■□□□□ 0.42
CLRN1-203ENST00000328863 SH3D19Q5HYK7 790 aa17.68■□□□□ 0.42
CLRN1-203ENST00000328863 ERO1AQ96HE7 468 aa17.68■□□□□ 0.42
CLRN1-203ENST00000328863 RAD50Q92878 1312 aa17.68■□□□□ 0.42
CLRN1-203ENST00000328863 MYH4Q9Y623 1939 aa17.67■□□□□ 0.42
CLRN1-203ENST00000328863 CAPN15O75808 1086 aa17.67■□□□□ 0.42
CLRN1-203ENST00000328863 GPAT2Q6NUI2 795 aa17.67■□□□□ 0.42
CLRN1-203ENST00000328863 SMCR8Q8TEV9 937 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms