RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 MAGEB6Q8N7X4 407 aa21.55■■□□□ 1.04
PTPMT1-201ENST00000326656 ASCC2Q9H1I8 757 aaPredicted RBP21.55■■□□□ 1.04
PTPMT1-201ENST00000326656 TMOD4Q9NZQ9 345 aa21.55■■□□□ 1.04
PTPMT1-201ENST00000326656 USP17L10C9JJH3 530 aa21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 TTC6Q86TZ1 520 aa21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 KIF1BPQ96EK5 621 aa21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 RNF208Q9H0X6 261 aa21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 EHD4Q9H223 541 aa21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 DNAJC18Q9H819 358 aa21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 ZBTB40Q9NUA8 1239 aa21.54■■□□□ 1.04
PTPMT1-201ENST00000326656 CEP290O15078 2479 aa21.53■■□□□ 1.04
PTPMT1-201ENST00000326656 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
PTPMT1-201ENST00000326656 USP5P45974 858 aa21.53■■□□□ 1.04
PTPMT1-201ENST00000326656 DYNLL1P63167 89 aaKnown RBP21.53■■□□□ 1.04
PTPMT1-201ENST00000326656 MORF4L1Q9UBU8 362 aa21.53■■□□□ 1.04
PTPMT1-201ENST00000326656 MYH1P12882 1939 aa21.53■■□□□ 1.04
PTPMT1-201ENST00000326656 DOCK3Q8IZD9 2030 aa21.52■■□□□ 1.04
PTPMT1-201ENST00000326656 MTMR2Q13614 643 aa21.52■■□□□ 1.04
PTPMT1-201ENST00000326656 TATDN1Q6P1N9 297 aa21.52■■□□□ 1.04
PTPMT1-201ENST00000326656 ANTXR1Q9H6X2 564 aa21.52■■□□□ 1.04
PTPMT1-201ENST00000326656 SAP30BPQ9UHR5 308 aaKnown RBP21.52■■□□□ 1.04
PTPMT1-201ENST00000326656 SERPINB13Q9UIV8 391 aa21.52■■□□□ 1.04
PTPMT1-201ENST00000326656 ZBTB21Q9ULJ3 1066 aa21.52■■□□□ 1.04
PTPMT1-201ENST00000326656 IRX3P78415 501 aaPredicted RBP21.51■■□□□ 1.03
PTPMT1-201ENST00000326656 JAG1P78504 1218 aa21.51■■□□□ 1.03
PTPMT1-201ENST00000326656 HABP4Q5JVS0 413 aaKnown RBP21.51■■□□□ 1.03
PTPMT1-201ENST00000326656 MIGA1Q8NAN2 632 aa21.51■■□□□ 1.03
PTPMT1-201ENST00000326656 SHISA4Q96DD7 197 aa21.51■■□□□ 1.03
PTPMT1-201ENST00000326656 IL1RAPL2Q9NP60 686 aa21.51■■□□□ 1.03
PTPMT1-201ENST00000326656 IFIT2P09913 472 aaKnown RBP21.5■■□□□ 1.03
PTPMT1-201ENST00000326656 GTF3C2Q8WUA4 911 aaPredicted RBP21.5■■□□□ 1.03
PTPMT1-201ENST00000326656 TAOK2Q9UL54 1235 aa21.5■■□□□ 1.03
PTPMT1-201ENST00000326656 SGPL1O95470 568 aa21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 UBE2Q1Q7Z7E8 422 aa21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 SIRT2Q8IXJ6 389 aa21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 U2AF1L4Q8WU68 220 aaKnown RBP21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 RIOK1Q9BRS2 568 aaKnown RBP21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 UNC93B1Q9H1C4 597 aa21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 RCAN3Q9UKA8 241 aa21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 COG6Q9Y2V7 657 aa21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 NDUFB9Q9Y6M9 179 aa21.49■■□□□ 1.03
PTPMT1-201ENST00000326656 MAGEB6P1A0A0J9YX57 407 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 GDF11O95390 407 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 INHAP05111 366 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 ELNP15502 786 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 SLC9C2Q5TAH2 1124 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 USP17L2Q6R6M4 530 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 GPRC5AQ8NFJ5 357 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 P2RX7Q99572 595 aaKnown RBP21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 HTATIP2Q9BUP3 242 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 GJD2Q9UKL4 321 aa21.48■■□□□ 1.03
PTPMT1-201ENST00000326656 GH2P01242 217 aa21.47■■□□□ 1.03
PTPMT1-201ENST00000326656 HERVK_113P62684 666 aa21.47■■□□□ 1.03
PTPMT1-201ENST00000326656 PDE3AQ14432 1141 aa21.47■■□□□ 1.03
PTPMT1-201ENST00000326656 C12orf42Q96LP6 360 aa21.47■■□□□ 1.03
PTPMT1-201ENST00000326656 PAK6Q9NQU5 681 aaPredicted RBP21.47■■□□□ 1.03
PTPMT1-201ENST00000326656 PDE6AP16499 860 aa21.46■■□□□ 1.03
PTPMT1-201ENST00000326656 CERKLQ49MI3 558 aaPredicted RBP21.46■■□□□ 1.03
PTPMT1-201ENST00000326656 CRNKL1Q9BZJ0 848 aaKnown RBP21.46■■□□□ 1.03
PTPMT1-201ENST00000326656 EMILIN3Q9NT22 766 aa21.46■■□□□ 1.03
PTPMT1-201ENST00000326656 USP14P54578 494 aa21.45■■□□□ 1.02
PTPMT1-201ENST00000326656 KIAA1683Q9H0B3 1180 aa21.45■■□□□ 1.02
PTPMT1-201ENST00000326656 CABP5Q9NP86 173 aa21.45■■□□□ 1.02
PTPMT1-201ENST00000326656 GOLIM4O00461 696 aa21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 HMGCRP04035 888 aa21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 XRCC5P13010 732 aaKnown RBP21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 MAPK4P31152 587 aa21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 ABCB5Q2M3G0 1257 aa21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 SHROOM1Q2M3G4 852 aaPredicted RBP21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 DPF3Q92784 378 aa21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 CRISPLD2Q9H0B8 497 aa21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 RBPJLQ9UBG7 517 aa21.44■■□□□ 1.02
PTPMT1-201ENST00000326656 TCRBV5S4A2TA0A5A2 114 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 H0YGN5 161 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 APBB1O00213 710 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 FARP2O94887 1054 aaPredicted RBP21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 TFRCP02786 760 aaKnown RBP21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 POLR3DP05423 398 aaPredicted RBP21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 ATP5JP18859 108 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 PLCD1P51178 756 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 TRMT44Q8IYL2 757 aaKnown RBP21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 SOCS4Q8WXH5 440 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 DEFB118Q96PH6 123 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 FEZ1Q99689 392 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 ZNF532Q9HCE3 1301 aa21.43■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L15C9J2P7 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L13C9JLJ4 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L11C9JVI0 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L18D6R9N7 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L22D6RA61 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L17D6RBQ6 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L19D6RCP7 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L20D6RJB6 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 SHMT1P34896 483 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 GABPAQ06546 454 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 USP17L24Q0WX57 530 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 NUDT12Q9BQG2 462 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 TXNRD2Q9NNW7 524 aa21.42■■□□□ 1.02
PTPMT1-201ENST00000326656 MCM9Q9NXL9 1143 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms