RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 HSP90AA5PQ58FG0 334 aa16.18■□□□□ 0.18
NUP98-201ENST00000324932 AMFRQ9UKV5 643 aa16.18■□□□□ 0.18
NUP98-201ENST00000324932 F8W031 263 aaPredicted RBP16.18■□□□□ 0.18
NUP98-201ENST00000324932 LONRF2Q1L5Z9 754 aa16.18■□□□□ 0.18
NUP98-201ENST00000324932 DAPK3O43293 454 aa16.18■□□□□ 0.18
NUP98-201ENST00000324932 OPHN1O60890 802 aa16.18■□□□□ 0.18
NUP98-201ENST00000324932 OR8K1Q8NGG5 319 aa16.18■□□□□ 0.18
NUP98-201ENST00000324932 LRWD1Q9UFC0 647 aa16.18■□□□□ 0.18
NUP98-201ENST00000324932 ZNF215Q9UL58 517 aaPredicted RBP16.18■□□□□ 0.18
NUP98-201ENST00000324932 GADD45BO75293 160 aaPredicted RBP16.17■□□□□ 0.18
NUP98-201ENST00000324932 LRCH2Q5VUJ6 765 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 TRIM68Q6AZZ1 485 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 ARHGAP42A6NI28 874 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 SGSM2O43147 1006 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 COG7P83436 770 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 SNCBQ16143 134 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 AFG3L2Q9Y4W6 797 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 B4E1Z4 1266 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 ATP8B1O43520 1251 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 FAF1Q9UNN5 650 aaPredicted RBP16.17■□□□□ 0.18
NUP98-201ENST00000324932 LRRD1A4D1F6 860 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 DKC1O60832 514 aaKnown RBP eCLIP16.17■□□□□ 0.18
NUP98-201ENST00000324932 TCP1P17987 556 aaKnown RBP16.17■□□□□ 0.18
NUP98-201ENST00000324932 PRR16Q569H4 304 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
NUP98-201ENST00000324932 KRT25Q7Z3Z0 450 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 GDAP1L1Q96MZ0 367 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 TBC1D8O95759 1140 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 RASIP1Q5U651 963 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 MGARPQ8TDB4 240 aa16.17■□□□□ 0.18
NUP98-201ENST00000324932 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
NUP98-201ENST00000324932 SPATS2LQ9NUQ6 558 aaKnown RBP16.16■□□□□ 0.18
NUP98-201ENST00000324932 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
NUP98-201ENST00000324932 BRD1O95696 1058 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 LDHBP07195 334 aaKnown RBP16.16■□□□□ 0.18
NUP98-201ENST00000324932 ZBTB17Q13105 803 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 NONOQ15233 471 aaKnown RBP eCLIP16.16■□□□□ 0.18
NUP98-201ENST00000324932 ANKRD2Q9GZV1 360 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 HAUS4Q9H6D7 363 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 RBBP5Q15291 538 aaKnown RBP16.16■□□□□ 0.18
NUP98-201ENST00000324932 RPAINQ86UA6 219 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 CWF19L2Q2TBE0 894 aaKnown RBP16.16■□□□□ 0.18
NUP98-201ENST00000324932 PPP4R1Q8TF05 950 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 TRIM4Q9C037 500 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.16■□□□□ 0.18
NUP98-201ENST00000324932 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 TXKP42681 527 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 GUCY2FP51841 1108 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 IDI1Q13907 227 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 TAF12Q16514 161 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 KRT40Q6A162 431 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 TSPYL6Q8N831 410 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 SH2D4AQ9H788 454 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 SNX29Q8TEQ0 813 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 RNF34Q969K3 372 aa16.16■□□□□ 0.18
NUP98-201ENST00000324932 ARHGEF35A5YM69 484 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 CCDC89Q8N998 374 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 MRFAP1L1Q96HT8 127 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
NUP98-201ENST00000324932 GNA14O95837 355 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 PHBP35232 272 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 NBPF14Q5TI25 921 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 TYW1BQ6NUM6 668 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 RRAGAQ7L523 313 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 THEGQ9P2T0 379 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
NUP98-201ENST00000324932 GRK7Q8WTQ7 553 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 RIC8AQ9NPQ8 531 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 USTQ9Y2C2 406 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 CCNT1O60563 726 aaKnown RBP16.15■□□□□ 0.18
NUP98-201ENST00000324932 SLC12A2P55011 1212 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 HAUS8Q9BT25 410 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 NCOA5Q9HCD5 579 aaKnown RBP16.15■□□□□ 0.18
NUP98-201ENST00000324932 STRN3Q13033 797 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 DBN1Q16643 649 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 CFAP61Q8NHU2 1237 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 PPP2R2CQ9Y2T4 447 aa16.15■□□□□ 0.18
NUP98-201ENST00000324932 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.18
NUP98-201ENST00000324932 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
NUP98-201ENST00000324932 EXOC3O60645 756 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 SMIM24O75264 130 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 CA8P35219 290 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 APPBP2Q92624 585 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 VEZTQ9HBM0 779 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 DENND2AQ9ULE3 1009 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 SUDS3Q9H7L9 328 aaPredicted RBP16.14■□□□□ 0.17
NUP98-201ENST00000324932 EVI5O60447 810 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 SF3A3Q12874 501 aaKnown RBP eCLIP16.14■□□□□ 0.177e-7■■■■□ 23.2
NUP98-201ENST00000324932 CASC4Q6P4E1 433 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 CCDC93Q567U6 631 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 CTAGE3PQ8IX95 158 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 PRPF31Q8WWY3 499 aaKnown RBP16.14■□□□□ 0.17
NUP98-201ENST00000324932 DIXDC1Q155Q3 683 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 OTUD7BQ6GQQ9 843 aa16.14■□□□□ 0.17
NUP98-201ENST00000324932 CDC37L1Q7L3B6 337 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms