RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 AKR1B1P15121 316 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 RXRAP19793 462 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 JAG1P78504 1218 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 FKBP1CQ5VVH2 108 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 ZNF444Q8N0Y2 327 aaPredicted RBP18■□□□□ 0.47
PRPF3-201ENST00000324862 CHMP4CQ96CF2 233 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 NAP1L2Q9ULW6 460 aaPredicted RBP18■□□□□ 0.47
PRPF3-201ENST00000324862 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
PRPF3-201ENST00000324862 ST3GAL1Q11201 340 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 TMEM67Q5HYA8 995 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 NBPF12Q5TAG4 269 aaPredicted RBP18■□□□□ 0.47
PRPF3-201ENST00000324862 MYL10Q9BUA6 226 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 TAF1DQ9H5J8 278 aaPredicted RBP18■□□□□ 0.47
PRPF3-201ENST00000324862 TNKSO95271 1327 aa18■□□□□ 0.47
PRPF3-201ENST00000324862 GDF11O95390 407 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 TSPY3P0CV98 308 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 TSPY8P0CW00 308 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 ENAHQ8N8S7 591 aaPredicted RBP17.99■□□□□ 0.47
PRPF3-201ENST00000324862 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.99■□□□□ 0.47
PRPF3-201ENST00000324862 AGXT2Q9BYV1 514 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.99■□□□□ 0.47
PRPF3-201ENST00000324862 LIMCH1Q9UPQ0 1083 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 ADM5C9JUS6 153 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 PPFIA3O75145 1194 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 BECN1Q14457 450 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 EHD4Q9H223 541 aa17.99■□□□□ 0.47
PRPF3-201ENST00000324862 ZSCAN10Q96SZ4 725 aaPredicted RBP17.98■□□□□ 0.47
PRPF3-201ENST00000324862 UBAC1Q9BSL1 405 aa17.98■□□□□ 0.47
PRPF3-201ENST00000324862 RRAGCQ9HB90 399 aa17.98■□□□□ 0.47
PRPF3-201ENST00000324862 ANGEL1Q9UNK9 670 aaKnown RBP17.98■□□□□ 0.47
PRPF3-201ENST00000324862 PCP11498 1178 aaKnown RBP17.98■□□□□ 0.47
PRPF3-201ENST00000324862 TNNI2P48788 182 aa17.98■□□□□ 0.47
PRPF3-201ENST00000324862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRPF3-201ENST00000324862 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 MPHOSPH10O00566 681 aaKnown RBP17.97■□□□□ 0.47
PRPF3-201ENST00000324862 TNFAIP1Q13829 316 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 SEC23AQ15436 765 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 FOXP4Q8IVH2 680 aaPredicted RBP17.97■□□□□ 0.47
PRPF3-201ENST00000324862 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 ALDH8A1Q9H2A2 487 aaPredicted RBP17.97■□□□□ 0.47
PRPF3-201ENST00000324862 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 KLF18A0A0U1RQI7 1052 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
PRPF3-201ENST00000324862 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
PRPF3-201ENST00000324862 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
PRPF3-201ENST00000324862 TATDN1Q6P1N9 297 aa17.96■□□□□ 0.47
PRPF3-201ENST00000324862 RASGRP2Q7LDG7 609 aa17.96■□□□□ 0.47
PRPF3-201ENST00000324862 METTL16Q86W50 562 aaKnown RBP17.96■□□□□ 0.47
PRPF3-201ENST00000324862 CCDC83Q8IWF9 413 aa17.96■□□□□ 0.47
PRPF3-201ENST00000324862 CEP95Q96GE4 821 aa17.96■□□□□ 0.47
PRPF3-201ENST00000324862 TMEM87BQ96K49 555 aa17.96■□□□□ 0.47
PRPF3-201ENST00000324862 SWAP70Q9UH65 585 aa17.96■□□□□ 0.47
PRPF3-201ENST00000324862 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
PRPF3-201ENST00000324862 PRKG1Q13976 671 aa17.96■□□□□ 0.46
PRPF3-201ENST00000324862 WTAPQ15007 396 aa17.96■□□□□ 0.46
PRPF3-201ENST00000324862 CERKLQ49MI3 558 aaPredicted RBP17.96■□□□□ 0.46
PRPF3-201ENST00000324862 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.46
PRPF3-201ENST00000324862 IQCA1Q86XH1 822 aa17.96■□□□□ 0.46
PRPF3-201ENST00000324862 APOBEC3FQ8IUX4 373 aaKnown RBP17.96■□□□□ 0.46
PRPF3-201ENST00000324862 COL2A1P02458 1487 aaPredicted RBP17.95■□□□□ 0.46
PRPF3-201ENST00000324862 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
PRPF3-201ENST00000324862 PDIA3P30101 505 aaKnown RBP17.95■□□□□ 0.46
PRPF3-201ENST00000324862 USP50Q70EL3 339 aaPredicted RBP17.95■□□□□ 0.46
PRPF3-201ENST00000324862 SLKQ9H2G2 1235 aaPredicted RBP17.95■□□□□ 0.46
PRPF3-201ENST00000324862 ZNF287Q9HBT7 754 aa17.95■□□□□ 0.46
PRPF3-201ENST00000324862 MTMR7Q9Y216 660 aa17.95■□□□□ 0.46
PRPF3-201ENST00000324862 IQCA1LA6NCM1 817 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 FMR1Q06787 632 aaKnown RBP eCLIP17.94■□□□□ 0.46
PRPF3-201ENST00000324862 ANKRD1Q15327 319 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 CCDC84Q86UT8 332 aaPredicted RBP17.94■□□□□ 0.46
PRPF3-201ENST00000324862 MICU3Q86XE3 530 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 NEDD1Q8NHV4 660 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 DCPSQ96C86 337 aaKnown RBP17.94■□□□□ 0.46
PRPF3-201ENST00000324862 DAXXQ9UER7 740 aaPredicted RBP17.94■□□□□ 0.46
PRPF3-201ENST00000324862 HPS5Q9UPZ3 1129 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 MCM2P49736 904 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 SCRN1Q12765 414 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
PRPF3-201ENST00000324862 KRT26Q7Z3Y9 468 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 FBXL16Q8N461 479 aa17.94■□□□□ 0.46
PRPF3-201ENST00000324862 GLIS2Q9BZE0 524 aaPredicted RBP17.94■□□□□ 0.46
PRPF3-201ENST00000324862 ERICH2A1L162 156 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 GOLGA8BA8MQT2 603 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 SART3Q15020 963 aaKnown RBP17.93■□□□□ 0.46
PRPF3-201ENST00000324862 USP48Q86UV5 1035 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 HERC5Q9UII4 1024 aaKnown RBP17.93■□□□□ 0.46
PRPF3-201ENST00000324862 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 POLR2AP24928 1970 aaKnown RBP17.93■□□□□ 0.46
PRPF3-201ENST00000324862 GH2P01242 217 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 LIFRP42702 1097 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 SEPT2Q15019 361 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 MAP1SQ66K74 1059 aaPredicted RBP17.93■□□□□ 0.46
PRPF3-201ENST00000324862 APOA5Q6Q788 366 aa17.93■□□□□ 0.46
PRPF3-201ENST00000324862 HSP90AA1P07900 732 aaKnown RBP17.92■□□□□ 0.46
PRPF3-201ENST00000324862 RAB3GAP1Q15042 981 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 SGMS1Q86VZ5 419 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 SULF1Q8IWU6 871 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms