RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 IQCA1Q86XH1 822 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 ZFPM1Q8IX07 1006 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 MICALL2Q8IY33 904 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 TMTC2Q8N394 836 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 ZSCAN10Q96SZ4 725 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-202ENST00000324340 SLKQ9H2G2 1235 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-202ENST00000324340 TCP11L1Q9NUJ3 509 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 SWAP70Q9UH65 585 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 CNOT7Q9UIV1 285 aaKnown RBP14.94□□□□□ -0.02
DDX39A-202ENST00000324340 SERPINB13Q9UIV8 391 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-202ENST00000324340 GJA3Q9Y6H8 435 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 NID2Q14112 1375 aa14.94□□□□□ -0.02
DDX39A-202ENST00000324340 MYO1BO43795 1136 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 FAM83AQ86UY5 434 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 CCDC83Q8IWF9 413 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 NECAB1Q8N987 351 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 CHMP4CQ96CF2 233 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 UBAC1Q9BSL1 405 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 MKNK2Q9HBH9 465 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 PI4KBQ9UBF8 816 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 TNKSO95271 1327 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 PLIN4Q96Q06 1357 aa14.93□□□□□ -0.02
DDX39A-202ENST00000324340 KLF18A0A0U1RQI7 1052 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 ERICH2A1L162 156 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 DDTLA6NHG4 134 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-202ENST00000324340 TSPY2A6NKD2 308 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 GRIN3BO60391 1043 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 RCAN1P53805 252 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 SCRN1Q12765 414 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 TCP10Q12799 353 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 WTAPQ15007 396 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 APOA5Q6Q788 366 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 FOXP4Q8IVH2 680 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-202ENST00000324340 SMAP1Q8IYB5 467 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-202ENST00000324340 ZNF444Q8N0Y2 327 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-202ENST00000324340 ENAHQ8N8S7 591 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-202ENST00000324340 FAM151AQ8WW52 585 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 ANKS1AQ92625 1134 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 ZKSCAN3Q9BRR0 538 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 LLPHQ9BRT6 129 aaKnown RBP14.92□□□□□ -0.02
DDX39A-202ENST00000324340 SENP2Q9HC62 589 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 GPRC5DQ9NZD1 345 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 HPS5Q9UPZ3 1129 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 ZC3H4Q9UPT8 1303 aaKnown RBP14.92□□□□□ -0.02
DDX39A-202ENST00000324340 MYH8P13535 1937 aa14.92□□□□□ -0.02
DDX39A-202ENST00000324340 GREB1LQ9C091 1923 aaPredicted RBP14.91□□□□□ -0.02
DDX39A-202ENST00000324340 CLRN2A0PK11 232 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 EGFRP00533 1210 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 TFAP4Q01664 338 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 GPR162Q16538 588 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 NBPF9Q3BBW0 867 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 CCDC178Q5BJE1 867 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 FAM47AQ5JRC9 791 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 C9orf131Q5VYM1 1079 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 ZSCAN30Q86W11 494 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 DGKHQ86XP1 1220 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 NEDD1Q8NHV4 660 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 IL17RBQ9NRM6 502 aa14.91□□□□□ -0.02
DDX39A-202ENST00000324340 H7C1D1 291 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 SHMT1P34896 483 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 NOVP48745 357 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 STK3Q13188 491 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 KIF4BQ2VIQ3 1234 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 GBP4Q96PP9 640 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 PANK2Q9BZ23 570 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 DNAJC18Q9H819 358 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 PGAP2Q9UHJ9 254 aa14.9□□□□□ -0.02
DDX39A-202ENST00000324340 CCDC69A6NI79 296 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 GOLGA8BA8MQT2 603 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 TCP10L2B9ZVM9 353 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 TATDN1Q6P1N9 297 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 NFXL1Q6ZNB6 911 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 SAMD7Q7Z3H4 446 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 SMARCC2Q8TAQ2 1214 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 PRDM4Q9UKN5 801 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
DDX39A-202ENST00000324340 IGKV6D-41A0A0C4DH26 115 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 ZBTB43O43298 467 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 DHX16O60231 1041 aaKnown RBP14.88□□□□□ -0.03
DDX39A-202ENST00000324340 NMT2O60551 498 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 NCLP19338 710 aaKnown RBP14.88□□□□□ -0.03
DDX39A-202ENST00000324340 TNFAIP1Q13829 316 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 IFIT1BQ5T764 474 aaKnown RBP14.88□□□□□ -0.03
DDX39A-202ENST00000324340 CLEC17AQ6ZS10 378 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 ZNF654Q8IZM8 581 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
DDX39A-202ENST00000324340 CCDC17Q96LX7 622 aa14.88□□□□□ -0.03
DDX39A-202ENST00000324340 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.88□□□□□ -0.03
DDX39A-202ENST00000324340 HERC5Q9UII4 1024 aaKnown RBP14.88□□□□□ -0.03
DDX39A-202ENST00000324340 SMC3Q9UQE7 1217 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms