RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TMEM67Q5HYA8 995 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 RNF135Q8IUD6 432 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 SCYL3Q8IZE3 742 aa8.6□□□□□ -1.03
CSTF3-201ENST00000323959 F8W031 263 aaPredicted RBP8.59□□□□□ -1.03
CSTF3-201ENST00000323959 ADRB1P08588 477 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 SIGLEC14Q08ET2 396 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
CSTF3-201ENST00000323959 FAM89AQ96GI7 184 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 PRRC2BQ5JSZ5 2229 aaKnown RBP8.59□□□□□ -1.03
CSTF3-201ENST00000323959 UNC79Q9P2D8 2635 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 EPOPA6NHQ4 379 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 RFXAPO00287 272 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 CYBAP13498 195 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 LRRC41Q15345 812 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 CCL14Q16627 93 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 PLEKHH3Q7Z736 793 aa8.59□□□□□ -1.03
CSTF3-201ENST00000323959 PQBP1O60828 265 aaKnown RBP8.58□□□□□ -1.04
CSTF3-201ENST00000323959 KDM4AO75164 1064 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 IGHA2P01877 340 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 HOXC6P09630 235 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 EIF4A1P60842 406 aaKnown RBP8.58□□□□□ -1.04
CSTF3-201ENST00000323959 USP24Q9UPU5 2620 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 MYO9BQ13459 2157 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 LPXNO60711 386 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 CNGA1P29973 690 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 PDIA6Q15084 440 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
CSTF3-201ENST00000323959 PRKRIP1Q9H875 184 aaPredicted RBP8.58□□□□□ -1.04
CSTF3-201ENST00000323959 DOCK2Q92608 1830 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
CSTF3-201ENST00000323959 PDE8AO60658 829 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 RALBP1Q15311 655 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 ZNF804AQ7Z570 1209 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 GPRC5AQ8NFJ5 357 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 TSEN34Q9BSV6 310 aaKnown RBP8.57□□□□□ -1.04
CSTF3-201ENST00000323959 ROBO3Q96MS0 1386 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 SLC15A5A6NIM6 579 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 SEPT4O43236 478 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 PTPRAP18433 802 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 CRKP46108 304 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 RABGGTBP53611 331 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 COL19A1Q14993 1142 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 KRT40Q6A162 431 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 ZFPM1Q8IX07 1006 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 ZHX2Q9Y6X8 837 aa8.57□□□□□ -1.04
CSTF3-201ENST00000323959 SETXQ7Z333 2677 aaKnown RBP8.57□□□□□ -1.04
CSTF3-201ENST00000323959 CSF2RAP15509 400 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 TAP1Q03518 808 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 PHOSPHO2Q8TCD6 241 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 EDC3Q96F86 508 aaKnown RBP8.56□□□□□ -1.04
CSTF3-201ENST00000323959 NCOR2Q9Y618 2525 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 ATP2A2P16615 1042 aaKnown RBP8.56□□□□□ -1.04
CSTF3-201ENST00000323959 TRPV1Q8NER1 839 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 FAM151AQ8WW52 585 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 ARNTL2Q8WYA1 636 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 SLC9A7Q96T83 725 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 MRIQ9BWK5 157 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 TTF2Q9UNY4 1162 aaKnown RBP8.56□□□□□ -1.04
CSTF3-201ENST00000323959 PTPRZ1P23471 2315 aaPredicted RBP8.56□□□□□ -1.04
CSTF3-201ENST00000323959 CHD9Q3L8U1 2897 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 CA3P07451 260 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 ATP2B2Q01814 1243 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 PROSER3Q2NL68 480 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 OLFML2BQ68BL8 750 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 GPR142Q7Z601 462 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 NRBP1Q9UHY1 535 aa8.56□□□□□ -1.04
CSTF3-201ENST00000323959 COL4A3Q01955 1670 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 PFKMP08237 780 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 RSPO4Q2I0M5 234 aaPredicted RBP8.55□□□□□ -1.04
CSTF3-201ENST00000323959 RPUSD2Q8IZ73 545 aaKnown RBP8.55□□□□□ -1.04
CSTF3-201ENST00000323959 PLBD2Q8NHP8 589 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 CFAP54Q96N23 3096 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 MAP1BP46821 2468 aaKnown RBP8.55□□□□□ -1.04
CSTF3-201ENST00000323959 TNKSO95271 1327 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 TLR3O15455 904 aaKnown RBP8.55□□□□□ -1.04
CSTF3-201ENST00000323959 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
CSTF3-201ENST00000323959 ACRP10323 421 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 SMAD2Q15796 467 aaKnown RBP8.55□□□□□ -1.04
CSTF3-201ENST00000323959 XAGE3Q8WTP9 111 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 FERMT2Q96AC1 680 aa8.55□□□□□ -1.04
CSTF3-201ENST00000323959 ASCC2Q9H1I8 757 aaPredicted RBP8.55□□□□□ -1.04
CSTF3-201ENST00000323959 A0A1W2PQ45 241 aaPredicted RBP8.54□□□□□ -1.04
CSTF3-201ENST00000323959 A0A1W2PQY0 241 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 NCK2O43639 380 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 MYOGP15173 224 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 RNF180Q86T96 592 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 ASIC4Q96FT7 647 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 TPRP12270 2363 aaKnown RBP8.54□□□□□ -1.04
CSTF3-201ENST00000323959 TREML2Q5T2D2 321 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 KIAA2013Q8IYS2 634 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 GPR161Q8N6U8 529 aaKnown RBP8.54□□□□□ -1.04
CSTF3-201ENST00000323959 PABPC5Q96DU9 382 aaKnown RBP8.54□□□□□ -1.04
CSTF3-201ENST00000323959 RTKNQ9BST9 563 aa8.54□□□□□ -1.04
CSTF3-201ENST00000323959 MYH3P11055 1940 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 APBB1O00213 710 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 LMNAP02545 664 aaKnown RBP8.53□□□□□ -1.04
CSTF3-201ENST00000323959 KCNJ4P48050 445 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 TIGD5Q53EQ6 642 aa8.53□□□□□ -1.04
CSTF3-201ENST00000323959 CCAR1Q8IX12 1150 aaKnown RBP8.53□□□□□ -1.04
CSTF3-201ENST00000323959 THUMPD2Q9BTF0 503 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms