RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ASCC2Q9H1I8 757 aaPredicted RBP15.06■□□□□ 0
TPM3-204ENST00000323144 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
TPM3-204ENST00000323144 ZNF236Q9UL36 1845 aa15.06■□□□□ 0
TPM3-204ENST00000323144 GREB1LQ9C091 1923 aaPredicted RBP15.05■□□□□ 0
TPM3-204ENST00000323144 HLA-DOAP06340 250 aa15.05■□□□□ -0
TPM3-204ENST00000323144 ASNSP08243 561 aa15.05■□□□□ -0
TPM3-204ENST00000323144 C20orf194Q5TEA3 1177 aa15.05■□□□□ -0
TPM3-204ENST00000323144 DNAJC2Q99543 621 aaKnown RBP15.05■□□□□ -0
TPM3-204ENST00000323144 RIOK1Q9BRS2 568 aaKnown RBP15.05■□□□□ -0
TPM3-204ENST00000323144 TRIM34Q9BYJ4 488 aa15.05■□□□□ -0
TPM3-204ENST00000323144 TBC1D2Q9BYX2 928 aa15.05■□□□□ -0
TPM3-204ENST00000323144 AS3MTQ9HBK9 375 aa15.05■□□□□ -0
TPM3-204ENST00000323144 ZBTB40Q9NUA8 1239 aa15.05■□□□□ -0
TPM3-204ENST00000323144 COL11A1P12107 1806 aaPredicted RBP15.04■□□□□ -0
TPM3-204ENST00000323144 ADCY3O60266 1144 aa15.04■□□□□ -0
TPM3-204ENST00000323144 PDE6AP16499 860 aa15.04■□□□□ -0
TPM3-204ENST00000323144 USP5P45974 858 aa15.04■□□□□ -0
TPM3-204ENST00000323144 WDR18Q9BV38 432 aa15.04■□□□□ -0
TPM3-204ENST00000323144 BIN2Q9UBW5 565 aaPredicted RBP15.04■□□□□ -0
TPM3-204ENST00000323144 DDX19BQ9UMR2 479 aa15.04■□□□□ -0
TPM3-204ENST00000323144 GOLIM4O00461 696 aa15.03■□□□□ -0
TPM3-204ENST00000323144 GH2P01242 217 aa15.03■□□□□ -0
TPM3-204ENST00000323144 BACE1P56817 501 aa15.03■□□□□ -0
TPM3-204ENST00000323144 MAP3K12Q12852 859 aa15.03■□□□□ -0
TPM3-204ENST00000323144 ZYXQ15942 572 aaKnown RBP15.03■□□□□ -0
TPM3-204ENST00000323144 SLFNL1Q499Z3 407 aa15.03■□□□□ -0
TPM3-204ENST00000323144 UBE2Q1Q7Z7E8 422 aa15.03■□□□□ -0
TPM3-204ENST00000323144 KIF1BPQ96EK5 621 aa15.03■□□□□ -0
TPM3-204ENST00000323144 RNF208Q9H0X6 261 aa15.03■□□□□ -0
TPM3-204ENST00000323144 TXNRD2Q9NNW7 524 aa15.03■□□□□ -0
TPM3-204ENST00000323144 RCAN3Q9UKA8 241 aa15.03■□□□□ -0
TPM3-204ENST00000323144 ZNF532Q9HCE3 1301 aa15.02■□□□□ -0
TPM3-204ENST00000323144 CHGBP05060 677 aa15.02■□□□□ -0
TPM3-204ENST00000323144 GJA8P48165 433 aa15.02■□□□□ -0
TPM3-204ENST00000323144 UBXN2AP68543 259 aa15.02■□□□□ -0
TPM3-204ENST00000323144 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
TPM3-204ENST00000323144 IRF5Q13568 498 aa15.02■□□□□ -0
TPM3-204ENST00000323144 LCORLQ8N3X6 602 aa15.02■□□□□ -0
TPM3-204ENST00000323144 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
TPM3-204ENST00000323144 EHD4Q9H223 541 aa15.02■□□□□ -0
TPM3-204ENST00000323144 TCRBV5S4A2TA0A5A2 114 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 IGSF3O75054 1194 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 GJB1P08034 283 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 SHMT1P34896 483 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 GCLCP48506 637 aaPredicted RBP15.01□□□□□ -0.01
TPM3-204ENST00000323144 HERVK_113P62684 666 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 TRIM32Q13049 653 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 PABPC4Q13310 644 aaKnown RBP eCLIP15.01□□□□□ -0.01
TPM3-204ENST00000323144 HSP90AB4PQ58FF6 505 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 POTEEQ6S8J3 1075 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 CLASRPQ8N2M8 674 aaKnown RBP15.01□□□□□ -0.01
TPM3-204ENST00000323144 SDR42E1Q8WUS8 393 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 COA7Q96BR5 231 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 TMOD4Q9NZQ9 345 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 MORF4L1Q9UBU8 362 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 SERPINB13Q9UIV8 391 aa15.01□□□□□ -0.01
TPM3-204ENST00000323144 MAGEB6P1A0A0J9YX57 407 aa15□□□□□ -0.01
TPM3-204ENST00000323144 USP17L10C9JJH3 530 aa15□□□□□ -0.01
TPM3-204ENST00000323144 H0YGN5 161 aa15□□□□□ -0.01
TPM3-204ENST00000323144 HMMRO75330 724 aa15□□□□□ -0.01
TPM3-204ENST00000323144 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
TPM3-204ENST00000323144 IFIT2P09913 472 aaKnown RBP15□□□□□ -0.01
TPM3-204ENST00000323144 CYP2D6P10635 497 aa15□□□□□ -0.01
TPM3-204ENST00000323144 MS4A1P11836 297 aa15□□□□□ -0.01
TPM3-204ENST00000323144 PLCD1P51178 756 aa15□□□□□ -0.01
TPM3-204ENST00000323144 HABP4Q5JVS0 413 aaKnown RBP15□□□□□ -0.01
TPM3-204ENST00000323144 TATDN1Q6P1N9 297 aa15□□□□□ -0.01
TPM3-204ENST00000323144 FOXP4Q8IVH2 680 aaPredicted RBP15□□□□□ -0.01
TPM3-204ENST00000323144 RPAP2Q8IXW5 612 aaPredicted RBP15□□□□□ -0.01
TPM3-204ENST00000323144 FEZ1Q99689 392 aa15□□□□□ -0.01
TPM3-204ENST00000323144 EMILIN3Q9NT22 766 aa15□□□□□ -0.01
TPM3-204ENST00000323144 CEP290O15078 2479 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 CERS3Q8IU89 383 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 CLEC10AQ8IUN9 316 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 SLC44A5Q8NCS7 719 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 ACER1Q8TDN7 264 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 PXYLP1Q8TE99 480 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.99□□□□□ -0.01
TPM3-204ENST00000323144 TRIB2Q92519 343 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 GCC1Q96CN9 775 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 P2RX7Q99572 595 aaKnown RBP14.99□□□□□ -0.01
TPM3-204ENST00000323144 PAGR1Q9BTK6 254 aa14.99□□□□□ -0.01
TPM3-204ENST00000323144 PAK6Q9NQU5 681 aaPredicted RBP14.99□□□□□ -0.01
TPM3-204ENST00000323144 SMIM22K7EJ46 135 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 SMARCA5O60264 1052 aaPredicted RBP14.98□□□□□ -0.01
TPM3-204ENST00000323144 MBD4O95243 580 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 VCAM1P19320 739 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 HOXA7P31268 230 aaPredicted RBP14.98□□□□□ -0.01
TPM3-204ENST00000323144 GUCY1A2P33402 732 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 GABPAQ06546 454 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 RAB3GAP1Q15042 981 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 TTF1Q15361 905 aaPredicted RBP14.98□□□□□ -0.01
TPM3-204ENST00000323144 DIS3LQ8TF46 1054 aaKnown RBP14.98□□□□□ -0.01
TPM3-204ENST00000323144 C12orf42Q96LP6 360 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 DEFB118Q96PH6 123 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 CRNKL1Q9BZJ0 848 aaKnown RBP14.98□□□□□ -0.01
TPM3-204ENST00000323144 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.98□□□□□ -0.01
TPM3-204ENST00000323144 PORCNQ9H237 461 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 BOLA2Q9H3K6 86 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms