RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 PDE3AQ14432 1141 aa24.18■■□□□ 1.46
SSNA1-201ENST00000322310 Q3C1V9 767 aa24.18■■□□□ 1.46
SSNA1-201ENST00000322310 USP6NLQ92738 828 aa24.18■■□□□ 1.46
SSNA1-201ENST00000322310 DNAJC18Q9H819 358 aa24.18■■□□□ 1.46
SSNA1-201ENST00000322310 PI4KBQ9UBF8 816 aa24.18■■□□□ 1.46
SSNA1-201ENST00000322310 LAMA2P24043 3122 aaKnown RBP24.17■■□□□ 1.46
SSNA1-201ENST00000322310 SRGAP3O43295 1099 aa24.17■■□□□ 1.46
SSNA1-201ENST00000322310 ASNSP08243 561 aa24.17■■□□□ 1.46
SSNA1-201ENST00000322310 MAPK4P31152 587 aa24.17■■□□□ 1.46
SSNA1-201ENST00000322310 CDCA7LQ96GN5 454 aa24.17■■□□□ 1.46
SSNA1-201ENST00000322310 HDAC5Q9UQL6 1122 aa24.17■■□□□ 1.46
SSNA1-201ENST00000322310 ERVK-9P63128 1117 aa24.16■■□□□ 1.46
SSNA1-201ENST00000322310 ERVK-24P63145 666 aa24.16■■□□□ 1.46
SSNA1-201ENST00000322310 GORABQ5T7V8 394 aa24.16■■□□□ 1.46
SSNA1-201ENST00000322310 POTEEQ6S8J3 1075 aa24.16■■□□□ 1.46
SSNA1-201ENST00000322310 GPR142Q7Z601 462 aa24.16■■□□□ 1.46
SSNA1-201ENST00000322310 TRMT44Q8IYL2 757 aaKnown RBP24.16■■□□□ 1.46
SSNA1-201ENST00000322310 PAGR1Q9BTK6 254 aa24.16■■□□□ 1.46
SSNA1-201ENST00000322310 GDF11O95390 407 aa24.15■■□□□ 1.46
SSNA1-201ENST00000322310 RGS2P41220 211 aa24.15■■□□□ 1.46
SSNA1-201ENST00000322310 MCAMP43121 646 aa24.15■■□□□ 1.46
SSNA1-201ENST00000322310 MORN1Q5T089 497 aa24.15■■□□□ 1.46
SSNA1-201ENST00000322310 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.15■■□□□ 1.46
SSNA1-201ENST00000322310 CCAR1Q8IX12 1150 aaKnown RBP24.15■■□□□ 1.46
SSNA1-201ENST00000322310 GUCD1Q96NT3 240 aa24.15■■□□□ 1.46
SSNA1-201ENST00000322310 AATFQ9NY61 560 aaKnown RBP eCLIP24.15■■□□□ 1.46
SSNA1-201ENST00000322310 LRP2BPQ9P2M1 347 aa24.15■■□□□ 1.46
SSNA1-201ENST00000322310 USP17L10C9JJH3 530 aa24.14■■□□□ 1.45
SSNA1-201ENST00000322310 ARID4AP29374 1257 aaPredicted RBP24.14■■□□□ 1.45
SSNA1-201ENST00000322310 DNAH12Q6ZR08 3092 aa24.14■■□□□ 1.45
SSNA1-201ENST00000322310 MAPKAPK5Q8IW41 473 aa24.14■■□□□ 1.45
SSNA1-201ENST00000322310 FAM161BQ96MY7 647 aa24.14■■□□□ 1.45
SSNA1-201ENST00000322310 APBA2Q99767 749 aa24.14■■□□□ 1.45
SSNA1-201ENST00000322310 DHX36Q9H2U1 1008 aaKnown RBP24.14■■□□□ 1.45
SSNA1-201ENST00000322310 C19orf81C9J6K1 198 aa24.13■■□□□ 1.45
SSNA1-201ENST00000322310 POTEB2H3BUK9 544 aa24.13■■□□□ 1.45
SSNA1-201ENST00000322310 PLEKHH3Q7Z736 793 aa24.13■■□□□ 1.45
SSNA1-201ENST00000322310 TGFBRAP1Q8WUH2 860 aa24.13■■□□□ 1.45
SSNA1-201ENST00000322310 NOL10Q9BSC4 688 aaKnown RBP24.13■■□□□ 1.45
SSNA1-201ENST00000322310 API5Q9BZZ5 524 aaKnown RBP24.13■■□□□ 1.45
SSNA1-201ENST00000322310 ZBTB21Q9ULJ3 1066 aa24.13■■□□□ 1.45
SSNA1-201ENST00000322310 CRACR2BQ8N4Y2 399 aaPredicted RBP24.12■■□□□ 1.45
SSNA1-201ENST00000322310 EMILIN3Q9NT22 766 aa24.12■■□□□ 1.45
SSNA1-201ENST00000322310 PALD1Q9ULE6 856 aa24.12■■□□□ 1.45
SSNA1-201ENST00000322310 NDUFB9Q9Y6M9 179 aa24.12■■□□□ 1.45
SSNA1-201ENST00000322310 EYSQ5T1H1 3165 aa24.12■■□□□ 1.45
SSNA1-201ENST00000322310 VCANP13611 3396 aa24.12■■□□□ 1.45
SSNA1-201ENST00000322310 FLT1P17948 1338 aa24.11■■□□□ 1.45
SSNA1-201ENST00000322310 SENP6Q9GZR1 1112 aaPredicted RBP24.11■■□□□ 1.45
SSNA1-201ENST00000322310 SNRKQ9NRH2 765 aa24.11■■□□□ 1.45
SSNA1-201ENST00000322310 MTX1Q13505 466 aa24.1■■□□□ 1.45
SSNA1-201ENST00000322310 NAA16Q6N069 864 aaPredicted RBP24.1■■□□□ 1.45
SSNA1-201ENST00000322310 ADGRA1Q86SQ6 560 aa24.1■■□□□ 1.45
SSNA1-201ENST00000322310 METTL16Q86W50 562 aaKnown RBP24.1■■□□□ 1.45
SSNA1-201ENST00000322310 TRIM34Q9BYJ4 488 aa24.1■■□□□ 1.45
SSNA1-201ENST00000322310 CWC22Q9HCG8 908 aaKnown RBP24.1■■□□□ 1.45
SSNA1-201ENST00000322310 FLRT1Q9NZU1 646 aa24.1■■□□□ 1.45
SSNA1-201ENST00000322310 BAG3O95817 575 aa24.09■■□□□ 1.45
SSNA1-201ENST00000322310 MAP2K5Q13163 448 aa24.09■■□□□ 1.45
SSNA1-201ENST00000322310 FAM109BQ6ICB4 259 aaPredicted RBP24.09■■□□□ 1.45
SSNA1-201ENST00000322310 FOXP4Q8IVH2 680 aaPredicted RBP24.09■■□□□ 1.45
SSNA1-201ENST00000322310 LBHD1Q9BQE6 289 aaPredicted RBP24.09■■□□□ 1.45
SSNA1-201ENST00000322310 SAP30BPQ9UHR5 308 aaKnown RBP24.09■■□□□ 1.45
SSNA1-201ENST00000322310 FRMPD3Q5JV73 1810 aa24.09■■□□□ 1.45
SSNA1-201ENST00000322310 MAST2Q6P0Q8 1798 aa24.08■■□□□ 1.45
SSNA1-201ENST00000322310 GNAI3P08754 354 aa24.08■■□□□ 1.45
SSNA1-201ENST00000322310 ATN1P54259 1190 aaPredicted RBP24.08■■□□□ 1.45
SSNA1-201ENST00000322310 ZYXQ15942 572 aaKnown RBP24.08■■□□□ 1.45
SSNA1-201ENST00000322310 GTF3C2Q8WUA4 911 aaPredicted RBP24.08■■□□□ 1.45
SSNA1-201ENST00000322310 EDC3Q96F86 508 aaKnown RBP24.08■■□□□ 1.45
SSNA1-201ENST00000322310 CNMDO75829 334 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 UQCRFS1P1P0C7P4 283 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 PLCG2P16885 1265 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 PPP4CP60510 307 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 WDR78Q5VTH9 848 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 USP17L2Q6R6M4 530 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 GINM1Q9NU53 330 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 CDK5RAP2Q96SN8 1893 aa24.07■■□□□ 1.44
SSNA1-201ENST00000322310 MFSD14CQ5VZR4 134 aa24.06■■□□□ 1.44
SSNA1-201ENST00000322310 TRMT2AQ8IZ69 625 aaKnown RBP24.06■■□□□ 1.44
SSNA1-201ENST00000322310 RABGAP1Q9Y3P9 1069 aa24.06■■□□□ 1.44
SSNA1-201ENST00000322310 GH2P01242 217 aa24.05■■□□□ 1.44
SSNA1-201ENST00000322310 CNGA1P29973 690 aa24.05■■□□□ 1.44
SSNA1-201ENST00000322310 DDX20Q9UHI6 824 aaKnown RBP24.05■■□□□ 1.44
SSNA1-201ENST00000322310 PNMA6EA0A0J9YXQ4 647 aa24.04■■□□□ 1.44
SSNA1-201ENST00000322310 ZNF697Q5TEC3 545 aa24.04■■□□□ 1.44
SSNA1-201ENST00000322310 FOCADQ5VW36 1801 aa24.04■■□□□ 1.44
SSNA1-201ENST00000322310 GLRX3O76003 335 aaKnown RBP24.03■■□□□ 1.44
SSNA1-201ENST00000322310 CYP2E1P05181 493 aaPredicted RBP24.03■■□□□ 1.44
SSNA1-201ENST00000322310 PTPREP23469 700 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 CYP2C19P33261 490 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 RTP1P59025 263 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 DYNLL1P63167 89 aaKnown RBP24.03■■□□□ 1.44
SSNA1-201ENST00000322310 CCNA1P78396 465 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 G3BP1Q13283 466 aaKnown RBP eCLIP24.03■■□□□ 1.44
SSNA1-201ENST00000322310 TTC39AQ5SRH9 613 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 LPAR1Q92633 364 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 C12orf42Q96LP6 360 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 FEZ1Q99689 392 aa24.03■■□□□ 1.44
SSNA1-201ENST00000322310 SPTBN5Q9NRC6 3674 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms