RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 JAG2Q9Y219 1238 aa16.12■□□□□ 0.17
PABPC1-201ENST00000318607 MNAT1P51948 309 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
PABPC1-201ENST00000318607 NUTM2AQ8IVF1 878 aaPredicted RBP16.11■□□□□ 0.17
PABPC1-201ENST00000318607 CHP1Q99653 195 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 EIF3CLB5ME19 914 aaKnown RBP16.11■□□□□ 0.17
PABPC1-201ENST00000318607 HOXB7P09629 217 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 CYP27A1Q02318 531 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 EIF3CQ99613 913 aaKnown RBP16.11■□□□□ 0.17
PABPC1-201ENST00000318607 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.11■□□□□ 0.17
PABPC1-201ENST00000318607 ZNF185O15231 689 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 IL15P40933 162 aaPredicted RBP16.11■□□□□ 0.17
PABPC1-201ENST00000318607 ATP1A2P50993 1020 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 GOLGA5Q8TBA6 731 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 ABCA3Q99758 1704 aa16.11■□□□□ 0.17
PABPC1-201ENST00000318607 SLC7A5Q01650 507 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 PPARAQ07869 468 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
PABPC1-201ENST00000318607 LRRIQ3A6PVS8 624 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-201ENST00000318607 IKBKBO14920 756 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 STX10O60499 249 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 RNF40O75150 1001 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 UBXN1Q04323 297 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 ANKZF1Q9H8Y5 726 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 AKAP2Q9Y2D5 859 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 ERICH2A1L162 156 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 RANBP6O60518 1105 aaKnown RBP16.1■□□□□ 0.17
PABPC1-201ENST00000318607 SLC52A2Q9HAB3 445 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 CDC23Q9UJX2 597 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 ADGRG1Q9Y653 693 aa16.1■□□□□ 0.17
PABPC1-201ENST00000318607 MED1Q15648 1581 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-201ENST00000318607 EIF5P55010 431 aaKnown RBP16.09■□□□□ 0.17
PABPC1-201ENST00000318607 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
PABPC1-201ENST00000318607 ADAMTS13Q76LX8 1427 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
PABPC1-201ENST00000318607 MCM7P33993 719 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 MAGEB6Q8N7X4 407 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 RNF225M0QZC1 329 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-201ENST00000318607 CDKL5O76039 1030 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 MBD4O95243 580 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 PACS2Q86VP3 889 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 TSPYL1Q9H0U9 437 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 DEF6Q9H4E7 631 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 ZSWIM5Q9P217 1185 aa16.09■□□□□ 0.17
PABPC1-201ENST00000318607 CCDC151A5D8V7 595 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 TULP2O00295 520 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
PABPC1-201ENST00000318607 NOSTRINQ8IVI9 506 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 NEDD4P46934 1319 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 SYNRGQ9UMZ2 1314 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 CYP2D7A0A087X1C5 515 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 ATL3Q6DD88 541 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 TMEM139Q8IV31 216 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 CCDC148Q8NFR7 591 aa16.08■□□□□ 0.16
PABPC1-201ENST00000318607 SMCR8Q8TEV9 937 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-201ENST00000318607 NAPGQ99747 312 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-201ENST00000318607 TRIM49BA6NDI0 452 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 MB21D2Q8IYB1 491 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-201ENST00000318607 V9GY48 417 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-201ENST00000318607 RTN1Q16799 776 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 BEND6Q5SZJ8 279 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-201ENST00000318607 KIFC2Q96AC6 838 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 JRKLQ9Y4A0 524 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 WNK3Q9BYP7 1800 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 PEAK1Q9H792 1746 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-201ENST00000318607 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 SDR42E1Q8WUS8 393 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 FAM53CQ9NYF3 392 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 DUSP10Q9Y6W6 482 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 PTPRUQ92729 1446 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
PABPC1-201ENST00000318607 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 IPO7O95373 1038 aaKnown RBP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 PDE6BP35913 854 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 PHKA1P46020 1223 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 RNF187Q5TA31 235 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 FBXW10Q5XX13 1052 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 CEP112Q8N8E3 955 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 APPBP2Q92624 585 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 EXOC4Q96A65 974 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-201ENST00000318607 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 ALS2Q96Q42 1657 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
PABPC1-201ENST00000318607 ATP2B2Q01814 1243 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms