RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 TMEM259Q4ZIN3 620 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 MAP3K21Q5TCX8 1036 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 NELFBQ8WX92 580 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
USF3-201ENST00000316407 FBLN1P23142 703 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 BIRC3Q13489 604 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 TUBB2AQ13885 445 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 CCDC93Q567U6 631 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 MIGA1Q8NAN2 632 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 FBXO41Q8TF61 875 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 TUBB2BQ9BVA1 445 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 CTTNBP2NLQ9P2B4 639 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 NUTM2BA6NNL0 878 aaPredicted RBP9.66□□□□□ -0.86
USF3-201ENST00000316407 NUTM2EB1AL46 878 aaPredicted RBP9.66□□□□□ -0.86
USF3-201ENST00000316407 ENC1O14682 589 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 IFNB1P01574 187 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 PICALMQ13492 652 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 BLZF1Q9H2G9 400 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 SCHIP1Q9P0W5 487 aaPredicted RBP9.66□□□□□ -0.86
USF3-201ENST00000316407 SAT1P21673 171 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 EEF2KMTQ96G04 330 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 PPP1R13BQ96KQ4 1090 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 SBNO1A3KN83 1393 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 NAIPQ13075 1403 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 AMOTQ4VCS5 1084 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 ICE2Q659A1 982 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 KIFAP3Q92845 792 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 TRIM14Q14142 442 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 GRAMD4Q6IC98 578 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 PHF23Q9BUL5 403 aaPredicted RBP9.66□□□□□ -0.86
USF3-201ENST00000316407 ZNF711Q9Y462 761 aa9.66□□□□□ -0.86
USF3-201ENST00000316407 H0Y3Z8 333 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 PDCD2Q16342 344 aaPredicted RBP9.65□□□□□ -0.86
USF3-201ENST00000316407 HAUS1Q96CS2 278 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 SYNJ1O43426 1573 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 CREB3O43889 395 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 CTAGE3PQ8IX95 158 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 INTS4Q96HW7 963 aaKnown RBP9.65□□□□□ -0.86
USF3-201ENST00000316407 CYTH2Q99418 400 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 CRNKL1Q9BZJ0 848 aaKnown RBP9.65□□□□□ -0.86
USF3-201ENST00000316407 G3BP2Q9UN86 482 aaKnown RBP9.65□□□□□ -0.86
USF3-201ENST00000316407 EPB41P11171 864 aaKnown RBP9.65□□□□□ -0.86
USF3-201ENST00000316407 LONRF2Q1L5Z9 754 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 RRAGAQ7L523 313 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 OTUD6AQ7L8S5 288 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.65□□□□□ -0.86
USF3-201ENST00000316407 GPT2Q8TD30 523 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 OTUD7AQ8TE49 926 aaPredicted RBP9.65□□□□□ -0.86
USF3-201ENST00000316407 SEPT8Q92599 483 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 STAMQ92783 540 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 THEGQ9P2T0 379 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 MYO1AQ9UBC5 1043 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 EEF1DP29692 281 aaKnown RBP9.65□□□□□ -0.86
USF3-201ENST00000316407 PCYT1AP49585 367 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 CUL4BQ13620 913 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 RILPL1Q5EBL4 403 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 DAPK1P53355 1430 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 HOMER3Q9NSC5 361 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 COBLO75128 1261 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 JPH4Q96JJ6 628 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 PTPRGP23470 1445 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 GIPC1O14908 333 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 PKP1Q13835 747 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 ESR2Q92731 530 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 USP6NLQ92738 828 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 ASXL1Q8IXJ9 1541 aa9.65□□□□□ -0.86
USF3-201ENST00000316407 SH3BGRP55822 239 aaPredicted RBP9.65□□□□□ -0.87
USF3-201ENST00000316407 JADE1Q6IE81 842 aa9.65□□□□□ -0.87
USF3-201ENST00000316407 KRT14P02533 472 aa9.65□□□□□ -0.87
USF3-201ENST00000316407 TMTC1Q8IUR5 882 aa9.65□□□□□ -0.87
USF3-201ENST00000316407 FAM167BQ9BTA0 163 aa9.65□□□□□ -0.87
USF3-201ENST00000316407 GOLGA4Q13439 2230 aaKnown RBP9.65□□□□□ -0.87
USF3-201ENST00000316407 FGD5Q6ZNL6 1462 aa9.65□□□□□ -0.87
USF3-201ENST00000316407 SPDYE3A6NKU9 549 aa9.65□□□□□ -0.87
USF3-201ENST00000316407 CCDC197Q8NCU1 140 aa9.65□□□□□ -0.87
USF3-201ENST00000316407 ADCY8P40145 1251 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 CWF19L2Q2TBE0 894 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 PDE4DQ08499 809 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 NFE2L3Q9Y4A8 694 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 CDK13Q14004 1512 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 WDR46O15213 610 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 MAN1A2O60476 641 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 NLRP12P59046 1061 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 RPS6KA2Q15349 733 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 RAB17Q9H0T7 212 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 SLC9C1Q4G0N8 1177 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 JAG2Q9Y219 1238 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 HSP90AA5PQ58FG0 334 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 SLC9C2Q5TAH2 1124 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 MCTP2Q6DN12 878 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 TRMT10CQ7L0Y3 403 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 MYL10Q9BUA6 226 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 C6orf50Q9HD87 102 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 TMOD3Q9NYL9 352 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 LARSQ9P2J5 1176 aaKnown RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 F8W031 263 aaPredicted RBP9.64□□□□□ -0.87
USF3-201ENST00000316407 HS2ST1Q7LGA3 356 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 CNNM2Q9H8M5 875 aa9.64□□□□□ -0.87
USF3-201ENST00000316407 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 233.6 ms