RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 LRCH3Q96II8 777 aa14.08□□□□□ -0.15
CCDC89-201ENST00000316398 NOL10Q9BSC4 688 aaKnown RBP14.08□□□□□ -0.15
CCDC89-201ENST00000316398 TXNRD2Q9NNW7 524 aa14.08□□□□□ -0.15
CCDC89-201ENST00000316398 COL6A1P12109 1028 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 HERVK_113P62684 666 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 IRX3P78415 501 aaPredicted RBP14.07□□□□□ -0.16
CCDC89-201ENST00000316398 MTMR2Q13614 643 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 LHX8Q68G74 356 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 POTEEQ6S8J3 1075 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 GTF3C2Q8WUA4 911 aaPredicted RBP14.07□□□□□ -0.16
CCDC89-201ENST00000316398 TGFBRAP1Q8WUH2 860 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 SOCS4Q8WXH5 440 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 CYP2E1P05181 493 aaPredicted RBP14.07□□□□□ -0.16
CCDC89-201ENST00000316398 TRIM27P14373 513 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 CYP2B6P20813 491 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 POLA2Q14181 598 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 MORN1Q5T089 497 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 EMILIN3Q9NT22 766 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 AATFQ9NY61 560 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC89-201ENST00000316398 PALD1Q9ULE6 856 aa14.07□□□□□ -0.16
CCDC89-201ENST00000316398 PRKAR2AP13861 404 aaKnown RBP14.06□□□□□ -0.16
CCDC89-201ENST00000316398 ATP8B2P98198 1209 aa14.06□□□□□ -0.16
CCDC89-201ENST00000316398 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
CCDC89-201ENST00000316398 TATDN1Q6P1N9 297 aa14.06□□□□□ -0.16
CCDC89-201ENST00000316398 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
CCDC89-201ENST00000316398 ATF7IPQ6VMQ6 1270 aa14.06□□□□□ -0.16
CCDC89-201ENST00000316398 ADGRA1Q86SQ6 560 aa14.06□□□□□ -0.16
CCDC89-201ENST00000316398 C7orf61Q8IZ16 206 aa14.06□□□□□ -0.16
CCDC89-201ENST00000316398 SSH3Q8TE77 659 aa14.06□□□□□ -0.16
CCDC89-201ENST00000316398 LOC285556D6RIA3 1793 aa14.06□□□□□ -0.16
CCDC89-201ENST00000316398 ERVK-9P63128 1117 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 ERVK-24P63145 666 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 TNNI3KQ59H18 835 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L2Q6R6M4 530 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 CERS3Q8IU89 383 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 MAPKAPK5Q8IW41 473 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 TDHQ8IZJ6 230 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 SNRKQ9NRH2 765 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 FPGT-TNNI3KV9GXZ4 949 aa14.05□□□□□ -0.16
CCDC89-201ENST00000316398 FLT1P17948 1338 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 PEX10O60683 326 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 RGS2P41220 211 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 MAGEA10P43363 369 aaPredicted RBP14.04□□□□□ -0.16
CCDC89-201ENST00000316398 PDE3AQ14432 1141 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 GPR142Q7Z601 462 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 PLEKHH3Q7Z736 793 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
CCDC89-201ENST00000316398 DEFB123Q8N688 67 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 C12orf42Q96LP6 360 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 ZBTB21Q9ULJ3 1066 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 ZMYND8Q9ULU4 1186 aaPredicted RBP14.04□□□□□ -0.16
CCDC89-201ENST00000316398 NOP58Q9Y2X3 529 aaKnown RBP14.04□□□□□ -0.16
CCDC89-201ENST00000316398 RABGAP1Q9Y3P9 1069 aa14.04□□□□□ -0.16
CCDC89-201ENST00000316398 PFASO15067 1338 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 PLXNB2O15031 1838 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 ALPK3Q96L96 1907 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 CCAR1Q8IX12 1150 aaKnown RBP14.03□□□□□ -0.16
CCDC89-201ENST00000316398 EDC3Q96F86 508 aaKnown RBP14.03□□□□□ -0.16
CCDC89-201ENST00000316398 DBNDD2Q9BQY9 259 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 TRIM34Q9BYJ4 488 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 PORCNQ9H237 461 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 STXBP5LQ9Y2K9 1186 aa14.03□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L15C9J2P7 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L13C9JLJ4 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L11C9JVI0 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L18D6R9N7 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L22D6RA61 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L17D6RBQ6 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L19D6RCP7 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L20D6RJB6 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 BCAR3O75815 825 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 IGHA2P01877 340 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 HLA-DOAP06340 250 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.16
CCDC89-201ENST00000316398 SYN1P17600 705 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 USP17L24Q0WX57 530 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 LBX2Q6XYB7 198 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 EHD4Q9H223 541 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 MTMR10Q9NXD2 777 aa14.02□□□□□ -0.16
CCDC89-201ENST00000316398 SURF6O75683 361 aaKnown RBP14.01□□□□□ -0.17
CCDC89-201ENST00000316398 GLRX3O76003 335 aaKnown RBP14.01□□□□□ -0.17
CCDC89-201ENST00000316398 GDF11O95390 407 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 HOXC6P09630 235 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 CCND3P30281 292 aaPredicted RBP14.01□□□□□ -0.17
CCDC89-201ENST00000316398 ZAP70P43403 619 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 CCNA1P78396 465 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 MAP2K5Q13163 448 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 CCL14Q16627 93 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 SHROOM1Q2M3G4 852 aaPredicted RBP14.01□□□□□ -0.17
CCDC89-201ENST00000316398 UBE2OQ9C0C9 1292 aaKnown RBP14.01□□□□□ -0.17
CCDC89-201ENST00000316398 KIAA1683Q9H0B3 1180 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 ATAD5Q96QE3 1844 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 CUL9Q8IWT3 2517 aa14.01□□□□□ -0.17
CCDC89-201ENST00000316398 DNAH12Q6ZR08 3092 aa14□□□□□ -0.17
CCDC89-201ENST00000316398 SLC15A5A6NIM6 579 aa14□□□□□ -0.17
CCDC89-201ENST00000316398 POTEB2H3BUK9 544 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms