RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 USP17L8P0C7I0 530 aa17.02■□□□□ 0.32
CLK4-201ENST00000316308 NLRP12P59046 1061 aa17.02■□□□□ 0.32
CLK4-201ENST00000316308 KCNH3Q9ULD8 1083 aa17.02■□□□□ 0.32
CLK4-201ENST00000316308 BTAF1O14981 1849 aa17.02■□□□□ 0.32
CLK4-201ENST00000316308 TOM1O60784 492 aa17.02■□□□□ 0.31
CLK4-201ENST00000316308 TROAPQ12815 778 aa17.02■□□□□ 0.31
CLK4-201ENST00000316308 DIXDC1Q155Q3 683 aa17.02■□□□□ 0.31
CLK4-201ENST00000316308 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.31
CLK4-201ENST00000316308 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.31
CLK4-201ENST00000316308 LRRC4BQ9NT99 713 aa17.02■□□□□ 0.31
CLK4-201ENST00000316308 FBXO2Q9UK22 296 aaPredicted RBP17.02■□□□□ 0.31
CLK4-201ENST00000316308 PCDHA5Q9Y5H7 936 aa17.02■□□□□ 0.31
CLK4-201ENST00000316308 DUOX1Q9NRD9 1551 aa17.02■□□□□ 0.31
CLK4-201ENST00000316308 TNRC6CQ9HCJ0 1690 aaKnown RBP17.01■□□□□ 0.31
CLK4-201ENST00000316308 RIOK3O14730 519 aaKnown RBP17.01■□□□□ 0.31
CLK4-201ENST00000316308 DEXIO95424 95 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 CASP1P29466 404 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 IFIT1BQ5T764 474 aaKnown RBP17.01■□□□□ 0.31
CLK4-201ENST00000316308 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
CLK4-201ENST00000316308 USP21Q9UK80 565 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 NID2Q14112 1375 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 SMC2O95347 1197 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 ZNF710Q8N1W2 664 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 DYNLL2Q96FJ2 89 aa17.01■□□□□ 0.31
CLK4-201ENST00000316308 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
CLK4-201ENST00000316308 RTCBQ9Y3I0 505 aaKnown RBP17.01■□□□□ 0.31
CLK4-201ENST00000316308 MYH6P13533 1939 aa17■□□□□ 0.31
CLK4-201ENST00000316308 A0A087X0B3 334 aa17■□□□□ 0.31
CLK4-201ENST00000316308 NPHP1O15259 732 aa17■□□□□ 0.31
CLK4-201ENST00000316308 CDC25BP30305 580 aa17■□□□□ 0.31
CLK4-201ENST00000316308 CCZ1BP86790 482 aa17■□□□□ 0.31
CLK4-201ENST00000316308 CCZ1P86791 482 aaPredicted RBP17■□□□□ 0.31
CLK4-201ENST00000316308 RASGRP2Q7LDG7 609 aa17■□□□□ 0.31
CLK4-201ENST00000316308 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
CLK4-201ENST00000316308 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
CLK4-201ENST00000316308 POLR2DO15514 142 aaKnown RBP17■□□□□ 0.31
CLK4-201ENST00000316308 TPM3P06753 285 aa17■□□□□ 0.31
CLK4-201ENST00000316308 TPTE2Q6XPS3 522 aa17■□□□□ 0.31
CLK4-201ENST00000316308 KRBA2Q6ZNG9 492 aa17■□□□□ 0.31
CLK4-201ENST00000316308 KRI1Q8N9T8 703 aaKnown RBP17■□□□□ 0.31
CLK4-201ENST00000316308 BRIP1Q9BX63 1249 aa17■□□□□ 0.31
CLK4-201ENST00000316308 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
CLK4-201ENST00000316308 NPY5RQ15761 445 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 SRBD1Q8N5C6 995 aaKnown RBP16.99■□□□□ 0.31
CLK4-201ENST00000316308 CNNM3Q8NE01 707 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 SERTAD1Q9UHV2 236 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 SKILP12757 684 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
CLK4-201ENST00000316308 EPSTI1Q96J88 318 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 NAT10Q9H0A0 1025 aaKnown RBP16.99■□□□□ 0.31
CLK4-201ENST00000316308 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
CLK4-201ENST00000316308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLK4-201ENST00000316308 CUTAO60888 179 aa16.98■□□□□ 0.31
CLK4-201ENST00000316308 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
CLK4-201ENST00000316308 NAA30Q147X3 362 aaPredicted RBP16.98■□□□□ 0.31
CLK4-201ENST00000316308 ARMCX5Q6P1M9 558 aa16.98■□□□□ 0.31
CLK4-201ENST00000316308 TMC6Q7Z403 805 aa16.98■□□□□ 0.31
CLK4-201ENST00000316308 SLC44A5Q8NCS7 719 aa16.98■□□□□ 0.31
CLK4-201ENST00000316308 ANKIB1Q9P2G1 1089 aa16.98■□□□□ 0.31
CLK4-201ENST00000316308 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
CLK4-201ENST00000316308 PTPREP23469 700 aa16.98■□□□□ 0.31
CLK4-201ENST00000316308 SAFBQ15424 915 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLK4-201ENST00000316308 FOXP1Q9H334 677 aaPredicted RBP16.98■□□□□ 0.31
CLK4-201ENST00000316308 FGRP09769 529 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
CLK4-201ENST00000316308 JMYQ8N9B5 988 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 MED15Q96RN5 788 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
CLK4-201ENST00000316308 RCSD1Q6JBY9 416 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
CLK4-201ENST00000316308 NYXQ9GZU5 481 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 FANCLQ9NW38 375 aa16.97■□□□□ 0.31
CLK4-201ENST00000316308 DYNC1I1O14576 645 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 FMR1Q06787 632 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLK4-201ENST00000316308 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
CLK4-201ENST00000316308 WASF1Q92558 559 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 STAMQ92783 540 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 TIGD1Q96MW7 591 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 PHF20Q9BVI0 1012 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
CLK4-201ENST00000316308 CCDC196A0A1B0GTZ2 297 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 TNNT1P13805 278 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 RFC4P35249 363 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 FANCCQ00597 558 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 ZNF174Q15697 407 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 CATIPQ7Z7H3 387 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 IL17RBQ9NRM6 502 aa16.96■□□□□ 0.31
CLK4-201ENST00000316308 UTRNP46939 3433 aa16.96■□□□□ 0.3
CLK4-201ENST00000316308 RRP9O43818 475 aaKnown RBP16.95■□□□□ 0.3
CLK4-201ENST00000316308 TPD52L1Q16890 204 aaPredicted RBP16.95■□□□□ 0.3
CLK4-201ENST00000316308 RILPL1Q5EBL4 403 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 IQCA1Q86XH1 822 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 STAG2Q8N3U4 1231 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms