RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 LONRF3Q496Y0 759 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 HAUS3Q68CZ6 603 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 ZNF589Q86UQ0 364 aaPredicted RBP15.41■□□□□ 0.06
SPAST-201ENST00000315285 SECISBP2LQ93073 1101 aaKnown RBP15.41■□□□□ 0.06
SPAST-201ENST00000315285 SLF1Q9BQI6 1058 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 NDUFA8P51970 172 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 C8orf74Q6P047 294 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 CMTR1Q8N1G2 835 aaKnown RBP15.41■□□□□ 0.06
SPAST-201ENST00000315285 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 HOMER2Q9NSB8 354 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 ROBO2Q9HCK4 1378 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 UBAP1LF5GYI3 381 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 GJC1P36383 396 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 LRRC8AQ8IWT6 810 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 FANCBQ8NB91 859 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 LZTS2Q9BRK4 669 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 TCHPQ9BT92 498 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 TRPM1Q7Z4N2 1603 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 PLEKHG1Q9ULL1 1385 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 CETN3O15182 167 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 GABPB1Q06547 395 aaPredicted RBP15.41■□□□□ 0.06
SPAST-201ENST00000315285 FAM47AQ5JRC9 791 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 ZMYM1Q5SVZ6 1142 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
SPAST-201ENST00000315285 EEF2P13639 858 aaKnown RBP15.4■□□□□ 0.06
SPAST-201ENST00000315285 RBM6P78332 1123 aaKnown RBP15.4■□□□□ 0.06
SPAST-201ENST00000315285 SELENOSQ9BQE4 189 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 FRMD4BQ9Y2L6 1034 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 TLDC2A0PJX2 215 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 USP17L12C9JPN9 530 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 USP17L21D6R901 530 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 MICALL1Q8N3F8 863 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 ADCY7P51828 1080 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 GLT8D2Q9H1C3 349 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 MTRF1LQ9UGC7 380 aaKnown RBP15.4■□□□□ 0.06
SPAST-201ENST00000315285 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 BTBD18B2RXH4 712 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 CABP7Q86V35 215 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 OTUD6BQ8N6M0 293 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 PAIP2Q9BPZ3 127 aaKnown RBP15.4■□□□□ 0.06
SPAST-201ENST00000315285 ZBTB21Q9ULJ3 1066 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 CLIC4Q9Y696 253 aa15.4■□□□□ 0.06
SPAST-201ENST00000315285 A0A1W2PQ27 194 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 A0A1W2PQ64 194 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 A0A1W2PQD8 194 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 KRBA2Q6ZNG9 492 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 MPHOSPH6Q99547 160 aaKnown RBP15.39■□□□□ 0.05
SPAST-201ENST00000315285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.059e-7■■□□□ 11.8
SPAST-201ENST00000315285 DYMQ7RTS9 669 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 GSTA5Q7RTV2 222 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 ARHGEF25Q86VW2 580 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 ANKS4BQ8N8V4 417 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 TDRD7Q8NHU6 1098 aaKnown RBP15.39■□□□□ 0.05
SPAST-201ENST00000315285 NOX5Q96PH1 765 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 RTEL1Q9NZ71 1219 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 MAGEA1P43355 309 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 CCDC121Q6ZUS5 278 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 FCHSD1Q86WN1 690 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 MAPKAPK5Q8IW41 473 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 PUS3Q9BZE2 481 aaKnown RBP15.39■□□□□ 0.05
SPAST-201ENST00000315285 TNKSO95271 1327 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 SMIM23A6NLE4 172 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 TICAM2Q86XR7 235 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 CCDC50Q8IVM0 306 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 AFAP1L1Q8TED9 768 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 CCDC51Q96ER9 411 aa15.39■□□□□ 0.05
SPAST-201ENST00000315285 ZSCAN10Q96SZ4 725 aaPredicted RBP15.39■□□□□ 0.05
SPAST-201ENST00000315285 ARPP21Q9UBL0 812 aaPredicted RBP15.39■□□□□ 0.05
SPAST-201ENST00000315285 CPSF1Q10570 1443 aaKnown RBP15.39■□□□□ 0.05
SPAST-201ENST00000315285 UBE3CQ15386 1083 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 HERC4Q5GLZ8 1057 aaPredicted RBP15.38■□□□□ 0.05
SPAST-201ENST00000315285 CPLX4Q7Z7G2 160 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 NSUN7Q8NE18 718 aaKnown RBP15.38■□□□□ 0.05
SPAST-201ENST00000315285 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 TET3O43151 1660 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 IQGAP3Q86VI3 1631 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 PRAMEF22A3QJZ6 481 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 ATP2A1O14983 1001 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 ZNF827Q17R98 1081 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 CCDC84Q86UT8 332 aaPredicted RBP15.38■□□□□ 0.05
SPAST-201ENST00000315285 CCDC26Q8TAB7 109 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 IPO4Q8TEX9 1081 aaKnown RBP15.38■□□□□ 0.05
SPAST-201ENST00000315285 CLIC6Q96NY7 704 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 FERMT1Q9BQL6 677 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 FANCLQ9NW38 375 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.38■□□□□ 0.05
SPAST-201ENST00000315285 PARP3Q9Y6F1 533 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 CALCRLQ16602 461 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 UTP14CQ5TAP6 766 aaKnown RBP15.38■□□□□ 0.05
SPAST-201ENST00000315285 REXO1Q8N1G1 1221 aaKnown RBP15.38■□□□□ 0.05
SPAST-201ENST00000315285 CCDC24Q8N4L8 307 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 TRIML1Q8N9V2 468 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 ZNF215Q9UL58 517 aaPredicted RBP15.38■□□□□ 0.05
SPAST-201ENST00000315285 ADORA1P30542 326 aa15.38■□□□□ 0.05
SPAST-201ENST00000315285 ETF1P62495 437 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms