RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CTAGE1Q96RT6 745 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 TRIM37O94972 964 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 SCG2P13521 617 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 TMEM132AQ24JP5 1023 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 BSDC1Q9NW68 430 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-201ENST00000314191 PAXBP1Q9Y5B6 917 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 NEDD4P46934 1319 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 CCT6AP40227 531 aaKnown RBP7.01□□□□□ -1.29
PRKDC-201ENST00000314191 LRRC47Q8N1G4 583 aaKnown RBP7.01□□□□□ -1.29
PRKDC-201ENST00000314191 PGBD1Q96JS3 809 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 DIP2AQ14689 1571 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 CYP2D6P10635 497 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 WWC2Q6AWC2 1192 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 MMP1P03956 469 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 IQGAP1P46940 1657 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 DDIT3P35638 169 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 ITPK1Q13572 414 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 LZTFL1Q9NQ48 299 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 NFE2L3Q9Y4A8 694 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 ZNF609O15014 1411 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 SMCO2A6NFE2 343 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 TBC1D9BQ66K14 1250 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 BLIDQ8IZY5 108 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 RNF216Q9NWF9 866 aaPredicted RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 XDHP47989 1333 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 SOS2Q07890 1332 aaPredicted RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 MYO1BO43795 1136 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 SLU7O95391 586 aaKnown RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 MECOMQ03112 1051 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 FAM84BQ96KN1 310 aaPredicted RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 CLEC4GQ6UXB4 293 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 ARHGEF1Q92888 912 aaKnown RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 USP17L8P0C7I0 530 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 ALDH1B1P30837 517 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 UBXN1Q04323 297 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 DPCR1Q3MIW9 517 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 GPIHBP1Q8IV16 184 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 GRAMD1CQ8IYS0 662 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7□□□□□ -1.293e-7■■■□□ 14.7
PRKDC-201ENST00000314191 CCNT1O60563 726 aaKnown RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 KRT25Q7Z3Z0 450 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 ZBTB9Q96C00 473 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 CTNND2Q9UQB3 1225 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 KLRF2D3W0D1 207 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 MRPL12P52815 198 aaKnown RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 POSTNQ15063 836 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 FRMPD2Q68DX3 1309 aaPredicted RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 SPDYE3A6NKU9 549 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 H0YIN7 160 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 ERCC3P19447 782 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 TRIM21P19474 475 aaKnown RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 CABP7Q86V35 215 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 TRPC5Q9UL62 973 aaPredicted RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 SEMA3EO15041 775 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 LONRF3Q496Y0 759 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 FAM114A1Q8IWE2 563 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 PXDNQ92626 1479 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 FGFR1OPO95684 399 aaKnown RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 CDC27P30260 824 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 BAG1Q99933 345 aaPredicted RBP7□□□□□ -1.29
PRKDC-201ENST00000314191 STK32BQ9NY57 414 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 LEMD3Q9Y2U8 911 aa7□□□□□ -1.29
PRKDC-201ENST00000314191 GSG1L2A8MUP6 293 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 TAF4BQ92750 862 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 DBNDD1Q9H9R9 158 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 CDC25AP30304 524 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 GRAPQ13588 217 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 GRAPLQ8TC17 118 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-201ENST00000314191 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.99□□□□□ -1.29
PRKDC-201ENST00000314191 PKD2L1Q9P0L9 805 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 KIF28PB7ZC32 967 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 RIOK3O14730 519 aaKnown RBP6.99□□□□□ -1.29
PRKDC-201ENST00000314191 INF2Q27J81 1249 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 PPP4R3BQ5MIZ7 849 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 TDRD7Q8NHU6 1098 aaKnown RBP6.99□□□□□ -1.29
PRKDC-201ENST00000314191 CCDC102AQ96A19 550 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 CGNQ9P2M7 1197 aaKnown RBP6.99□□□□□ -1.29
PRKDC-201ENST00000314191 A0A1W2PQ27 194 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 A0A1W2PQ64 194 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 A0A1W2PQD8 194 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 GOLPH3LQ9H4A5 285 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 USO1O60763 962 aaKnown RBP6.99□□□□□ -1.29
PRKDC-201ENST00000314191 TSGA10IPQ3SY00 556 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 CSRNP2Q9H175 543 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 TAB2Q9NYJ8 693 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 SAMM50Q9Y512 469 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 COL15A1P39059 1388 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 PPP1R12BO60237 982 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-201ENST00000314191 CAMTA2O94983 1202 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 WDR78Q5VTH9 848 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 SNX29Q8TEQ0 813 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 LRRC27Q9C0I9 530 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 NARFQ9UHQ1 456 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 AKR1B10O60218 316 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 COBLO75128 1261 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 SV2BQ7L1I2 683 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 TMEM87AQ8NBN3 555 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 TEKT1Q969V4 418 aa6.99□□□□□ -1.29
PRKDC-201ENST00000314191 EXOSC10Q01780 885 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms