RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TMEM51Q9NW97 253 aa15.78■□□□□ 0.12
MKS1-201ENST00000313863 DENND2AQ9ULE3 1009 aa15.78■□□□□ 0.12
MKS1-201ENST00000313863 ZNF330Q9Y3S2 320 aaPredicted RBP15.78■□□□□ 0.12
MKS1-201ENST00000313863 MROH5Q6ZUA9 1318 aa15.78■□□□□ 0.12
MKS1-201ENST00000313863 FOXN1O15353 648 aa15.77■□□□□ 0.12
MKS1-201ENST00000313863 TOB1P50616 345 aaPredicted RBP15.77■□□□□ 0.12
MKS1-201ENST00000313863 SMC1AQ14683 1233 aaKnown RBP15.77■□□□□ 0.12
MKS1-201ENST00000313863 SPATA1Q5VX52 437 aa15.77■□□□□ 0.12
MKS1-201ENST00000313863 STAG1Q8WVM7 1258 aa15.77■□□□□ 0.12
MKS1-201ENST00000313863 LPIN2Q92539 896 aa15.77■□□□□ 0.12
MKS1-201ENST00000313863 TMOD3Q9NYL9 352 aa15.77■□□□□ 0.12
MKS1-201ENST00000313863 ACTN4O43707 911 aaKnown RBP15.77■□□□□ 0.11
MKS1-201ENST00000313863 AK7Q96M32 723 aa15.77■□□□□ 0.11
MKS1-201ENST00000313863 MYL10Q9BUA6 226 aa15.77■□□□□ 0.11
MKS1-201ENST00000313863 GREM2Q9H772 168 aa15.77■□□□□ 0.11
MKS1-201ENST00000313863 AATFQ9NY61 560 aaKnown RBP eCLIP15.77■□□□□ 0.11
MKS1-201ENST00000313863 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.11
MKS1-201ENST00000313863 POLR3GO15318 223 aaPredicted RBP15.76■□□□□ 0.11
MKS1-201ENST00000313863 ERLIN1O75477 346 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 SEC31AO94979 1220 aaKnown RBP15.76■□□□□ 0.11
MKS1-201ENST00000313863 TUBBP07437 444 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 OAS2P29728 719 aaKnown RBP15.76■□□□□ 0.11
MKS1-201ENST00000313863 SRGAP1Q7Z6B7 1085 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 CNGA4Q8IV77 575 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 CRACR2BQ8N4Y2 399 aaPredicted RBP15.76■□□□□ 0.11
MKS1-201ENST00000313863 DDX17Q92841 729 aaKnown RBP15.76■□□□□ 0.11
MKS1-201ENST00000313863 PARD6BQ9BYG5 372 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 WWC3Q9ULE0 1092 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 RTL9Q8NET4 1388 aa15.76■□□□□ 0.11
MKS1-201ENST00000313863 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 SLC5A1P13866 664 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 PHKA1P46020 1223 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
MKS1-201ENST00000313863 SPECC1Q5M775 1068 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 HNRNPLLQ8WVV9 542 aaKnown RBP15.75■□□□□ 0.11
MKS1-201ENST00000313863 DHX58Q96C10 678 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 CARD10Q9BWT7 1032 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 MYH2Q9UKX2 1941 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 SYNRGQ9UMZ2 1314 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 TRIM75PA6NK02 468 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 PDE8AO60658 829 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 MBD4O95243 580 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 CHMP4BP1P59074 171 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 TRMT44Q8IYL2 757 aaKnown RBP15.75■□□□□ 0.11
MKS1-201ENST00000313863 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
MKS1-201ENST00000313863 IGSF22Q8N9C0 903 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 SPATA5Q8NB90 893 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 GSDMAQ96QA5 445 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 PYM1Q9BRP8 204 aaKnown RBP15.75■□□□□ 0.11
MKS1-201ENST00000313863 PRDM11Q9NQV5 511 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 SAMSN1Q9NSI8 373 aaKnown RBP15.75■□□□□ 0.11
MKS1-201ENST00000313863 KCNJ14Q9UNX9 436 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 TTF2Q9UNY4 1162 aaKnown RBP15.75■□□□□ 0.11
MKS1-201ENST00000313863 LRP5O75197 1615 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 PNPLA7Q6ZV29 1317 aa15.75■□□□□ 0.11
MKS1-201ENST00000313863 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 TDO2P48775 406 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 CTDSPL2Q05D32 466 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 MUM1L1Q5H9M0 696 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 RNF26Q9BY78 433 aaPredicted RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 EPB41L4AQ9HCS5 686 aaPredicted RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 STRN4Q9NRL3 753 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 PSD3Q9NYI0 1048 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 CDC23Q9UJX2 597 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 PCDHB6Q9Y5E3 794 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 ADGRG1Q9Y653 693 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 NUP98P52948 1817 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 ITIH6Q6UXX5 1313 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 COL5A2P05997 1499 aaPredicted RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 EIF3JO75822 258 aaKnown RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 KARSQ15046 597 aaKnown RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 MAGEB6Q8N7X4 407 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 NKX2-3Q8TAU0 364 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 BBXQ8WY36 941 aaPredicted RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 FUT8Q9BYC5 575 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 GBP3Q9H0R5 595 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 CSRNP2Q9H175 543 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 CWC15Q9P013 229 aaKnown RBP15.74■□□□□ 0.11
MKS1-201ENST00000313863 MYO1AQ9UBC5 1043 aa15.74■□□□□ 0.11
MKS1-201ENST00000313863 GUCY1A2P33402 732 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 TRIM14Q14142 442 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 LONRF2Q1L5Z9 754 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 RASGRP2Q7LDG7 609 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 FANCBQ8NB91 859 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 EXOC4Q96A65 974 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 UBAC1Q9BSL1 405 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 DESI2Q9BSY9 194 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 BRMS1Q9HCU9 246 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 STRCP1A6NGW2 1772 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 MYH8P13535 1937 aa15.73■□□□□ 0.11
MKS1-201ENST00000313863 CTAGE9A4FU28 777 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 GSG1L2A8MUP6 293 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 MFAP3LO75121 409 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 SASH3O75995 380 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms