RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 NUTM2AQ8IVF1 878 aaPredicted RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 BRIP1Q9BX63 1249 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 SEC31BQ9NQW1 1179 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 TRIM75PA6NK02 468 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 RGL2O15211 777 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 POLR2DO15514 142 aaKnown RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 NTSR2O95665 410 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 TPM1P09493 284 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 GUCY1A2P33402 732 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 CRKLP46109 303 aaKnown RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 PLCD1P51178 756 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 GABPB1Q06547 395 aaPredicted RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 UBE4AQ14139 1066 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 CATIPQ7Z7H3 387 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 DPF2Q92785 391 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 FERMT2Q96AC1 680 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 BRMS1Q9HCU9 246 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 SERTAD1Q9UHV2 236 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 THRAP3Q9Y2W1 955 aaKnown RBP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
LSMEM1-201ENST00000312849 DUOX1Q9NRD9 1551 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 MYH13Q9UKX3 1938 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 STX10O60499 249 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 ZNF18P17022 549 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 CDK11BP21127 795 aaKnown RBP11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 KRT2P35908 639 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 NUP133Q8WUM0 1156 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 PYM1Q9BRP8 204 aaKnown RBP11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 CACNA1SQ13698 1873 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 TNKSO95271 1327 aa11.03□□□□□ -0.64
LSMEM1-201ENST00000312849 CASZ1Q86V15 1759 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 MYH14Q7Z406 1995 aaKnown RBP11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 SEMA3EO15041 775 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 DDAH1O94760 285 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 FGRP09769 529 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 BMP6P22004 513 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 ATP6V1AP38606 617 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 NT5C2P49902 561 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 PDE4BQ07343 736 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 NAA30Q147X3 362 aaPredicted RBP11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 SPECC1LQ69YQ0 1117 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 CLEC4GQ6UXB4 293 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 ANKRD18AQ8IVF6 992 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 SMARCC1Q92922 1105 aaPredicted RBP11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 ZSCAN10Q96SZ4 725 aaPredicted RBP11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 ZKSCAN3Q9BRR0 538 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 PHF20Q9BVI0 1012 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 RAI14Q9P0K7 980 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 PRDM4Q9UKN5 801 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 NIP7Q9Y221 180 aaKnown RBP eCLIP11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 NFE2L3Q9Y4A8 694 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 PCDHB6Q9Y5E3 794 aa11.02□□□□□ -0.64
LSMEM1-201ENST00000312849 LAMB1P07942 1786 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 PDS5AQ29RF7 1337 aaKnown RBP11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 BAZ2AQ9UIF9 1905 aaKnown RBP11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 MINDY4BA8MYZ0 360 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 ELF2Q15723 593 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 CAVIN4Q5BKX8 364 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 IQCA1Q86XH1 822 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 REXO1L1PQ8IX06 675 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 KRT222Q8N1A0 295 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 MIGA1Q8NAN2 632 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 PKNOX2Q96KN3 472 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 CABP5Q9NP86 173 aa11.02□□□□□ -0.65
LSMEM1-201ENST00000312849 SCN7AQ01118 1682 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 AHDC1Q5TGY3 1603 aaPredicted RBP11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 COL5A3P25940 1745 aaPredicted RBP11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 UBE2Q2LH0YL09 131 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 SNAP23O00161 211 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 SLFN14P0C7P3 912 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 SIK1P57059 783 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 FAM193AP78312 1265 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 NR5A1Q13285 461 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 SF3B3Q15393 1217 aaKnown RBP11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 IFIT1BQ5T764 474 aaKnown RBP11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 TRIM65Q6PJ69 517 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 TMEM139Q8IV31 216 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 CSRNP2Q9H175 543 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 PRDM10Q9NQV6 1147 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 FAM53CQ9NYF3 392 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 DNAI1Q9UI46 699 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
LSMEM1-201ENST00000312849 MAST2Q6P0Q8 1798 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 TMEM232C9JQI7 657 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 ZBTB22O15209 634 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 FOXN1O15353 648 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 IGSF3O75054 1194 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 KIF20AO95235 890 aa11□□□□□ -0.65
LSMEM1-201ENST00000312849 PRR29P0C7W0 189 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms