RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 MTMR2Q13614 643 aa14.93□□□□□ -0.02
TPT1-201ENST00000309246 SHROOM1Q2M3G4 852 aaPredicted RBP14.93□□□□□ -0.02
TPT1-201ENST00000309246 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
TPT1-201ENST00000309246 DHX36Q9H2U1 1008 aaKnown RBP14.93□□□□□ -0.02
TPT1-201ENST00000309246 PIH1D3Q9NQM4 214 aaKnown RBP14.93□□□□□ -0.02
TPT1-201ENST00000309246 TLR7Q9NYK1 1049 aaKnown RBP14.93□□□□□ -0.02
TPT1-201ENST00000309246 PALD1Q9ULE6 856 aa14.93□□□□□ -0.02
TPT1-201ENST00000309246 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
TPT1-201ENST00000309246 GDF11O95390 407 aa14.92□□□□□ -0.02
TPT1-201ENST00000309246 TFRCP02786 760 aaKnown RBP14.92□□□□□ -0.02
TPT1-201ENST00000309246 PPP4CP60510 307 aa14.92□□□□□ -0.02
TPT1-201ENST00000309246 CRACR2BQ8N4Y2 399 aaPredicted RBP14.92□□□□□ -0.02
TPT1-201ENST00000309246 TRIM34Q9BYJ4 488 aa14.92□□□□□ -0.02
TPT1-201ENST00000309246 PAK6Q9NQU5 681 aaPredicted RBP14.92□□□□□ -0.02
TPT1-201ENST00000309246 RBM27Q9P2N5 1060 aaKnown RBP14.92□□□□□ -0.02
TPT1-201ENST00000309246 SAP30BPQ9UHR5 308 aaKnown RBP14.92□□□□□ -0.02
TPT1-201ENST00000309246 DBNLQ9UJU6 430 aaKnown RBP14.92□□□□□ -0.02
TPT1-201ENST00000309246 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
TPT1-201ENST00000309246 PEX10O60683 326 aa14.91□□□□□ -0.02
TPT1-201ENST00000309246 ASNSP08243 561 aa14.91□□□□□ -0.02
TPT1-201ENST00000309246 DYNLL1P63167 89 aaKnown RBP14.91□□□□□ -0.02
TPT1-201ENST00000309246 IRX3P78415 501 aaPredicted RBP14.91□□□□□ -0.02
TPT1-201ENST00000309246 ITPRIPQ8IWB1 547 aa14.91□□□□□ -0.02
TPT1-201ENST00000309246 FTSJ3Q8IY81 847 aaKnown RBP14.91□□□□□ -0.02
TPT1-201ENST00000309246 WDR18Q9BV38 432 aa14.91□□□□□ -0.02
TPT1-201ENST00000309246 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.028e-21■■■■□ 23.1
TPT1-201ENST00000309246 CCDC8Q9H0W5 538 aaPredicted RBP14.91□□□□□ -0.02
TPT1-201ENST00000309246 NR2E3Q9Y5X4 410 aa14.91□□□□□ -0.02
TPT1-201ENST00000309246 ZBTB7BO15156 539 aaPredicted RBP14.9□□□□□ -0.02
TPT1-201ENST00000309246 HMGCRP04035 888 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 RLBP1P12271 317 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 BACE1P56817 501 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 TRIM32Q13049 653 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 FOXP4Q8IVH2 680 aaPredicted RBP14.9□□□□□ -0.02
TPT1-201ENST00000309246 ZNF512BQ96KM6 892 aaPredicted RBP14.9□□□□□ -0.02
TPT1-201ENST00000309246 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 MORF4L1Q9UBU8 362 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 GJD2Q9UKL4 321 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 ZBTB21Q9ULJ3 1066 aa14.9□□□□□ -0.02
TPT1-201ENST00000309246 FRMPD3Q5JV73 1810 aa14.89□□□□□ -0.03
TPT1-201ENST00000309246 IDH1O75874 414 aaKnown RBP14.89□□□□□ -0.03
TPT1-201ENST00000309246 CYP7A1P22680 504 aa14.89□□□□□ -0.03
TPT1-201ENST00000309246 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
TPT1-201ENST00000309246 HNRNPUQ00839 825 aaKnown RBP eCLIP14.89□□□□□ -0.03
TPT1-201ENST00000309246 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
TPT1-201ENST00000309246 DIS3LQ8TF46 1054 aaKnown RBP14.89□□□□□ -0.03
TPT1-201ENST00000309246 EAF2Q96CJ1 260 aaPredicted RBP14.89□□□□□ -0.03
TPT1-201ENST00000309246 PAWRQ96IZ0 340 aaKnown RBP14.89□□□□□ -0.03
TPT1-201ENST00000309246 P2RX7Q99572 595 aaKnown RBP14.89□□□□□ -0.03
TPT1-201ENST00000309246 CRISPLD2Q9H0B8 497 aa14.89□□□□□ -0.03
TPT1-201ENST00000309246 NOP58Q9Y2X3 529 aaKnown RBP14.89□□□□□ -0.03
TPT1-201ENST00000309246 NDUFB9Q9Y6M9 179 aa14.89□□□□□ -0.03
TPT1-201ENST00000309246 MYH8P13535 1937 aa14.89□□□□□ -0.03
TPT1-201ENST00000309246 C19orf81C9J6K1 198 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 USP17L10C9JJH3 530 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 EVI5O60447 810 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 HOXA7P31268 230 aaPredicted RBP14.88□□□□□ -0.03
TPT1-201ENST00000309246 HERVK_113P62684 666 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 MIGA1Q8NAN2 632 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 PRO3102Q9H379 93 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 TXNRD2Q9NNW7 524 aa14.88□□□□□ -0.03
TPT1-201ENST00000309246 CYP2B6P20813 491 aa14.87□□□□□ -0.03
TPT1-201ENST00000309246 MAGEB6Q8N7X4 407 aa14.87□□□□□ -0.03
TPT1-201ENST00000309246 TRIB2Q92519 343 aa14.87□□□□□ -0.03
TPT1-201ENST00000309246 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
TPT1-201ENST00000309246 HMX1Q9NP08 348 aaPredicted RBP14.87□□□□□ -0.03
TPT1-201ENST00000309246 GINM1Q9NU53 330 aa14.87□□□□□ -0.03
TPT1-201ENST00000309246 GH2P01242 217 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 CAPN2P17655 700 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 USP5P45974 858 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 ZYXQ15942 572 aaKnown RBP14.86□□□□□ -0.03
TPT1-201ENST00000309246 CEP85Q6P2H3 762 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 NECAB2Q7Z6G3 386 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 GPRC5AQ8NFJ5 357 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 PAGR1Q9BTK6 254 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 EMILIN3Q9NT22 766 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 EXOC6BQ9Y2D4 811 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 RPTORQ8N122 1335 aa14.86□□□□□ -0.03
TPT1-201ENST00000309246 IGSF3O75054 1194 aa14.85□□□□□ -0.03
TPT1-201ENST00000309246 AACSQ86V21 672 aa14.85□□□□□ -0.03
TPT1-201ENST00000309246 NUDT12Q9BQG2 462 aa14.85□□□□□ -0.03
TPT1-201ENST00000309246 RBPJLQ9UBG7 517 aa14.85□□□□□ -0.03
TPT1-201ENST00000309246 ERVK-9P63128 1117 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 ERVK-24P63145 666 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 Q3C1V9 767 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 USP17L2Q6R6M4 530 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 POTEEQ6S8J3 1075 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 C7orf61Q8IZ16 206 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 ANKLE1Q8NAG6 615 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 SOCS4Q8WXH5 440 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 FEZ1Q99689 392 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 PORCNQ9H237 461 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 MYH7P12883 1935 aa14.84□□□□□ -0.03
TPT1-201ENST00000309246 BAZ2AQ9UIF9 1905 aaKnown RBP14.84□□□□□ -0.03
TPT1-201ENST00000309246 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
TPT1-201ENST00000309246 MAPK4P31152 587 aa14.83□□□□□ -0.04
TPT1-201ENST00000309246 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
TPT1-201ENST00000309246 MAP3K12Q12852 859 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms