RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 KCNMB2Q9Y691 235 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 LY75O60449 1722 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 ABCC6O95255 1503 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 CD163L1Q9NR16 1453 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 TNS2Q63HR2 1409 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 SART1O43290 800 aaKnown RBP6.61□□□□□ -1.35
CKS1B-201ENST00000308987 CDC27P30260 824 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 FLIIQ13045 1269 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 SLC15A2Q16348 729 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 SYT17Q9BSW7 474 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
CKS1B-201ENST00000308987 DOT1LQ8TEK3 1739 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 FSCN2O14926 492 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 ZNF827Q17R98 1081 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
CKS1B-201ENST00000308987 UBASH3BQ8TF42 649 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 FOXD4L4Q8WXT5 416 aaPredicted RBP6.6□□□□□ -1.35
CKS1B-201ENST00000308987 MYO19Q96H55 970 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 MFSD14AQ96MC6 490 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 TFIP11Q9UBB9 837 aaKnown RBP6.6□□□□□ -1.35
CKS1B-201ENST00000308987 CCDC39Q9UFE4 941 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 FAM208AQ9UK61 1670 aaKnown RBP6.6□□□□□ -1.35
CKS1B-201ENST00000308987 TAF1LQ8IZX4 1826 aa6.6□□□□□ -1.35
CKS1B-201ENST00000308987 ADAM11O75078 769 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 ITGB5P18084 799 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 ATP11AP98196 1134 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 CEP135Q66GS9 1140 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 ADAMTSL4Q6UY14 1074 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 NFXL1Q6ZNB6 911 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 TREML1Q86YW5 311 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 KLHL23Q8NBE8 558 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 ACSBG1Q96GR2 724 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 LRFN2Q9ULH4 789 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 LEMD3Q9Y2U8 911 aa6.59□□□□□ -1.35
CKS1B-201ENST00000308987 SBNO2Q9Y2G9 1366 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 EXOC5O00471 708 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 PREPP48147 710 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 DPYDQ12882 1025 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 COL19A1Q14993 1142 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 COL13A1Q5TAT6 717 aaPredicted RBP6.58□□□□□ -1.36
CKS1B-201ENST00000308987 NME9Q86XW9 330 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 KLHDC7BQ96G42 594 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 ANP32EQ9BTT0 268 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 MTFR1LQ9H019 292 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 ATG3Q9NT62 314 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 STK32BQ9NY57 414 aa6.58□□□□□ -1.36
CKS1B-201ENST00000308987 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 KTN1Q86UP2 1357 aaKnown RBP6.57□□□□□ -1.36
CKS1B-201ENST00000308987 CCDC7Q96M83 1385 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 ITGB4P16144 1822 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 EVC2Q86UK5 1308 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 TTC21AQ8NDW8 1320 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 JUNBP17275 347 aaPredicted RBP6.57□□□□□ -1.36
CKS1B-201ENST00000308987 ANKRD34AQ69YU3 496 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 FAM117BQ6P1L5 589 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 TP53INP2Q8IXH6 220 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 GLMNQ92990 594 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 FBXL18Q96ME1 805 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 NSD2O96028 1365 aa6.57□□□□□ -1.36
CKS1B-201ENST00000308987 SMNDC1O75940 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
CKS1B-201ENST00000308987 PRNPP04156 253 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 F13BP05160 661 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 FOSL1P15407 271 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
CKS1B-201ENST00000308987 FBLN7Q53RD9 439 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.56□□□□□ -1.36
CKS1B-201ENST00000308987 FBXL6Q8N531 539 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 KCNH5Q8NCM2 988 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 OR13H1Q8NG92 308 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 GIMAP7Q8NHV1 300 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
CKS1B-201ENST00000308987 ARXQ96QS3 562 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 SH2B1Q9NRF2 756 aaPredicted RBP6.56□□□□□ -1.36
CKS1B-201ENST00000308987 HIF3AQ9Y2N7 669 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 TOGARAM1Q9Y4F4 1720 aa6.56□□□□□ -1.36
CKS1B-201ENST00000308987 PNPLA7Q6ZV29 1317 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 EPHA1P21709 976 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 FBLN1P23142 703 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
CKS1B-201ENST00000308987 WEE1P30291 646 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 C1QTNF8P60827 252 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 HYAL2Q12891 473 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 PTK7Q13308 1070 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 CLUAP1Q96AJ1 413 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 SPACA7Q96KW9 195 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 RASSF4Q9H2L5 321 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 SLC12A5Q9H2X9 1139 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 SEC31BQ9NQW1 1179 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 NLRP2Q9NX02 1062 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 MAFBQ9Y5Q3 323 aaPredicted RBP6.55□□□□□ -1.36
CKS1B-201ENST00000308987 UBR3Q6ZT12 1888 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 ROCK2O75116 1388 aaKnown RBP6.55□□□□□ -1.36
CKS1B-201ENST00000308987 C5P01031 1676 aa6.55□□□□□ -1.36
CKS1B-201ENST00000308987 PRKCSHP14314 528 aaPredicted RBP6.54□□□□□ -1.36
CKS1B-201ENST00000308987 IL2RBP14784 551 aa6.54□□□□□ -1.36
CKS1B-201ENST00000308987 TRIP4Q15650 581 aaPredicted RBP6.54□□□□□ -1.36
CKS1B-201ENST00000308987 VSIG10LQ86VR7 867 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms