RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 JAK2O60674 1132 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 ENTPD3O75355 529 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 CTDNEP1O95476 244 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 RASA1P20936 1047 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 CACNB3P54284 484 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 SLC44A5Q8NCS7 719 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 TCP11L1Q9NUJ3 509 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 FAM198AQ9UFP1 575 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
KRT28-201ENST00000306658 CDKL5O76039 1030 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 PRELPP51888 382 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 GABPAQ06546 454 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 TCP10Q12799 353 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 CATIPQ7Z7H3 387 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 RAB11FIP4Q86YS3 637 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 ZNF654Q8IZM8 581 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 EHD4Q9H223 541 aa20.49■□□□□ 0.87
KRT28-201ENST00000306658 CCDC196A0A1B0GTZ2 297 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 CALM1P0DP23 149 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 CALM2P0DP24 149 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 CALM3P0DP25 149 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 LMNB1P20700 586 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 CLEC17AQ6ZS10 378 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 DGKHQ86XP1 1220 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 DDX11Q96FC9 970 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 PI4KBQ9UBF8 816 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 NID2Q14112 1375 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 MYO1BO43795 1136 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 DTNBO60941 627 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 ZSCAN22P10073 491 aaPredicted RBP20.48■□□□□ 0.87
KRT28-201ENST00000306658 RXRAP19793 462 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 NBR1Q14596 966 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 ZSCAN29Q8IWY8 852 aaPredicted RBP20.48■□□□□ 0.87
KRT28-201ENST00000306658 DPF2Q92785 391 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 MYL10Q9BUA6 226 aa20.48■□□□□ 0.87
KRT28-201ENST00000306658 NMT2O60551 498 aa20.47■□□□□ 0.87
KRT28-201ENST00000306658 ADD1P35611 737 aaKnown RBP20.47■□□□□ 0.87
KRT28-201ENST00000306658 ZFPM1Q8IX07 1006 aa20.47■□□□□ 0.87
KRT28-201ENST00000306658 NEDD1Q8NHV4 660 aa20.47■□□□□ 0.87
KRT28-201ENST00000306658 ANKS1AQ92625 1134 aa20.47■□□□□ 0.87
KRT28-201ENST00000306658 ZNF70Q9UC06 446 aaPredicted RBP20.47■□□□□ 0.87
KRT28-201ENST00000306658 RTN1Q16799 776 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 SPDYE2Q495Y8 402 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 FOXD4L5Q5VV16 416 aaPredicted RBP20.46■□□□□ 0.87
KRT28-201ENST00000306658 FOXP4Q8IVH2 680 aaPredicted RBP20.46■□□□□ 0.87
KRT28-201ENST00000306658 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 CRACR2BQ8N4Y2 399 aaPredicted RBP20.46■□□□□ 0.87
KRT28-201ENST00000306658 FANCBQ8NB91 859 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 NUP133Q8WUM0 1156 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 FOXD4L4Q8WXT5 416 aaPredicted RBP20.46■□□□□ 0.87
KRT28-201ENST00000306658 MYOZ2Q9NPC6 264 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 IL17RBQ9NRM6 502 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
KRT28-201ENST00000306658 VPS37CA5D8V6 355 aaPredicted RBP20.45■□□□□ 0.86
KRT28-201ENST00000306658 DDAH1O94760 285 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 CDC27P30260 824 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 MCM4P33991 863 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 ZNF280AP59817 542 aaPredicted RBP20.45■□□□□ 0.86
KRT28-201ENST00000306658 FKBP1CQ5VVH2 108 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 MTMR6Q9Y217 621 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 COL2A1P02458 1487 aaPredicted RBP20.45■□□□□ 0.86
KRT28-201ENST00000306658 DDTLA6NHG4 134 aaPredicted RBP20.45■□□□□ 0.86
KRT28-201ENST00000306658 RCSD1Q6JBY9 416 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 ZBED3Q96IU2 234 aaPredicted RBP20.45■□□□□ 0.86
KRT28-201ENST00000306658 TRIM34Q9BYJ4 488 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 KAT14Q9H8E8 782 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
KRT28-201ENST00000306658 ATP6V1DQ9Y5K8 247 aa20.45■□□□□ 0.86
KRT28-201ENST00000306658 ATRNL1Q5VV63 1379 aa20.44■□□□□ 0.86
KRT28-201ENST00000306658 CLRN2A0PK11 232 aa20.44■□□□□ 0.86
KRT28-201ENST00000306658 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
KRT28-201ENST00000306658 H3BQV1 296 aa20.44■□□□□ 0.86
KRT28-201ENST00000306658 BAG4O95429 457 aaKnown RBP20.44■□□□□ 0.86
KRT28-201ENST00000306658 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
KRT28-201ENST00000306658 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
KRT28-201ENST00000306658 FAM151AQ8WW52 585 aa20.44■□□□□ 0.86
KRT28-201ENST00000306658 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
KRT28-201ENST00000306658 TCP10L2B9ZVM9 353 aa20.43■□□□□ 0.86
KRT28-201ENST00000306658 WNT10BO00744 389 aa20.43■□□□□ 0.86
KRT28-201ENST00000306658 F13A1P00488 732 aa20.43■□□□□ 0.86
KRT28-201ENST00000306658 FDPSP14324 419 aaKnown RBP20.43■□□□□ 0.86
KRT28-201ENST00000306658 TROAPQ12815 778 aa20.43■□□□□ 0.86
KRT28-201ENST00000306658 SH3BP5LQ7L8J4 393 aa20.43■□□□□ 0.86
KRT28-201ENST00000306658 CCDC17Q96LX7 622 aa20.43■□□□□ 0.86
KRT28-201ENST00000306658 RBM28Q9NW13 759 aaKnown RBP20.43■□□□□ 0.86
KRT28-201ENST00000306658 MYH8P13535 1937 aa20.43■□□□□ 0.86
KRT28-201ENST00000306658 DICER1Q9UPY3 1922 aaKnown RBP20.43■□□□□ 0.86
KRT28-201ENST00000306658 DDX11L8A8MPP1 907 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 IFNAR1P17181 557 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 SHMT1P34896 483 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 NTRK3Q16288 839 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 MICALL2Q8IY33 904 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 VEZTQ9HBM0 779 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 CNOT7Q9UIV1 285 aaKnown RBP20.42■□□□□ 0.86
KRT28-201ENST00000306658 STX8Q9UNK0 236 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 PLIN4Q96Q06 1357 aa20.42■□□□□ 0.86
KRT28-201ENST00000306658 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
KRT28-201ENST00000306658 METTL16Q86W50 562 aaKnown RBP20.42■□□□□ 0.86
KRT28-201ENST00000306658 CTCFLQ8NI51 663 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms