RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CLCN6P51797 869 aa14.96□□□□□ -0.02
DDX54-201ENST00000306014 ZSCAN26Q16670 478 aa14.96□□□□□ -0.02
DDX54-201ENST00000306014 MICALCLQ6ZW33 695 aa14.96□□□□□ -0.02
DDX54-201ENST00000306014 CSGALNACT2Q8N6G5 542 aa14.96□□□□□ -0.02
DDX54-201ENST00000306014 GPR108Q9NPR9 543 aa14.96□□□□□ -0.02
DDX54-201ENST00000306014 TAF6LQ9Y6J9 622 aa14.96□□□□□ -0.02
DDX54-201ENST00000306014 TRIM14Q14142 442 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 NOC4LQ9BVI4 516 aaKnown RBP14.95□□□□□ -0.02
DDX54-201ENST00000306014 OPA1O60313 960 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 LETM2Q2VYF4 491 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 GRAMD1CQ8IYS0 662 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 NELFBQ8WX92 580 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 IFT81Q8WYA0 676 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 CPS1P31327 1500 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 TUBB2AQ13885 445 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 BRINP3Q76B58 766 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 FANCBQ8NB91 859 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 ATRIPQ8WXE1 791 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 FERMT2Q96AC1 680 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 TUBB2BQ9BVA1 445 aa14.95□□□□□ -0.02
DDX54-201ENST00000306014 ZC3H13Q5T200 1668 aaKnown RBP14.95□□□□□ -0.02
DDX54-201ENST00000306014 COBLO75128 1261 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 ERCC3P19447 782 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 PHKA1P46020 1223 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 FAM76AQ8TAV0 307 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 RABEP2Q9H5N1 569 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 DDX41Q9UJV9 622 aaKnown RBP14.94□□□□□ -0.02
DDX54-201ENST00000306014 PPP6R2O75170 966 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 PDE4DQ08499 809 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 NBPF5PQ86XG9 351 aaPredicted RBP14.94□□□□□ -0.02
DDX54-201ENST00000306014 CRACR2BQ8N4Y2 399 aaPredicted RBP14.94□□□□□ -0.02
DDX54-201ENST00000306014 PSMB7Q99436 277 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 ANKARQ7Z5J8 1434 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 JAKMIP2Q96AA8 810 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 BRD3Q15059 726 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 AFAP1L1Q8TED9 768 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 DYDC1Q8WWB3 177 aa14.94□□□□□ -0.02
DDX54-201ENST00000306014 PPP1R1BQ9UD71 204 aaPredicted RBP14.94□□□□□ -0.02
DDX54-201ENST00000306014 ADGRL3Q9HAR2 1447 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 FMR1NBQ8N0W7 255 aaPredicted RBP14.93□□□□□ -0.02
DDX54-201ENST00000306014 GREM2Q9H772 168 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 C6orf50Q9HD87 102 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 VAV2P52735 878 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 GPATCH11Q8N954 259 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 SDR42E1Q8WUS8 393 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
DDX54-201ENST00000306014 ATP2C2O75185 946 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 PLCD1P51178 756 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 KMT5BQ4FZB7 885 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 NLRP3Q96P20 1036 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.93□□□□□ -0.02
DDX54-201ENST00000306014 FRMPD1Q5SYB0 1578 aa14.93□□□□□ -0.02
DDX54-201ENST00000306014 GOLGA6L7A0A1B0GV03 622 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 VGLL3A8MV65 326 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 CTSWP56202 376 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 TRIML1Q8N9V2 468 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 PPARAQ07869 468 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 SPATA1Q5VX52 437 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 SMYD4Q8IYR2 804 aaPredicted RBP14.92□□□□□ -0.02
DDX54-201ENST00000306014 ZBTB38Q8NAP3 1195 aaPredicted RBP14.92□□□□□ -0.02
DDX54-201ENST00000306014 IPO4Q8TEX9 1081 aaKnown RBP14.92□□□□□ -0.02
DDX54-201ENST00000306014 EEF2KMTQ96G04 330 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 LRRC27Q9C0I9 530 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 PIK3C2BO00750 1634 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 ERBB3P21860 1342 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 PHLPP2Q6ZVD8 1323 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 C6orf229H3BNL8 230 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 CIAO1O76071 339 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 GTF2A1P52655 376 aaPredicted RBP14.92□□□□□ -0.02
DDX54-201ENST00000306014 NR5A1Q13285 461 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 TTC31Q49AM3 519 aaPredicted RBP14.92□□□□□ -0.02
DDX54-201ENST00000306014 VSTM4Q8IW00 320 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 RABGGTAQ92696 567 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 CSRNP2Q9H175 543 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 SAMSN1Q9NSI8 373 aaKnown RBP14.92□□□□□ -0.02
DDX54-201ENST00000306014 TNKSO95271 1327 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 CASP14P31944 242 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 STOX1Q6ZVD7 989 aa14.92□□□□□ -0.02
DDX54-201ENST00000306014 TNNI2P48788 182 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 TERF2Q15554 542 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 FAM98CQ17RN3 349 aaKnown RBP14.91□□□□□ -0.02
DDX54-201ENST00000306014 FCHSD1Q86WN1 690 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 GIMAP7Q8NHV1 300 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 PCCAP05165 728 aaPredicted RBP14.91□□□□□ -0.02
DDX54-201ENST00000306014 UBE3CQ15386 1083 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 MED23Q9ULK4 1368 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 USP42Q9H9J4 1324 aaKnown RBP14.91□□□□□ -0.02
DDX54-201ENST00000306014 RNASE9P60153 205 aaKnown RBP14.91□□□□□ -0.02
DDX54-201ENST00000306014 PPP2R5BQ15173 497 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 DHX40Q8IX18 779 aaKnown RBP14.91□□□□□ -0.02
DDX54-201ENST00000306014 SMARCC2Q8TAQ2 1214 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 PDE11AQ9HCR9 933 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 AATFQ9NY61 560 aaKnown RBP eCLIP14.91□□□□□ -0.02
DDX54-201ENST00000306014 USP21Q9UK80 565 aa14.91□□□□□ -0.02
DDX54-201ENST00000306014 ERVV-2B6SEH9 535 aa14.9□□□□□ -0.02
DDX54-201ENST00000306014 PNMA6AP0CW24 399 aaPredicted RBP14.9□□□□□ -0.02
DDX54-201ENST00000306014 NEFHP12036 1026 aa14.9□□□□□ -0.02
DDX54-201ENST00000306014 IQCB1Q15051 598 aa14.9□□□□□ -0.02
DDX54-201ENST00000306014 FAM47AQ5JRC9 791 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms