RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SOX10P56693 466 aa31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 JAG1P78504 1218 aa31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 HDAC1Q13547 482 aaPredicted RBP31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 SLFNL1Q499Z3 407 aa31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 SMCR8Q8TEV9 937 aaPredicted RBP31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 GCC1Q96CN9 775 aa31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 DCP1AQ9NPI6 582 aaPredicted RBP31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 ATP8A2Q9NTI2 1148 aa31.88■■■□□ 2.69
CDKN2A-201ENST00000304494 HTTP42858 3142 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 ERC2O15083 957 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 BCRP11274 1271 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 BACE1P56817 501 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 TREML2Q5T2D2 321 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 TSHZ3Q63HK5 1081 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 KBTBD3Q8NAB2 608 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 ARHGAP39Q9C0H5 1083 aa31.87■■■□□ 2.69
CDKN2A-201ENST00000304494 LOC285556D6RIA3 1793 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 C19orf81C9J6K1 198 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 PRMT2P55345 433 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 MTMR2Q13614 643 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 CERKLQ49MI3 558 aaPredicted RBP31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 DDRGK1Q96HY6 314 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 TMOD4Q9NZQ9 345 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 TAOK2Q9UL54 1235 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 MYH7P12883 1935 aa31.86■■■□□ 2.69
CDKN2A-201ENST00000304494 USP17L10C9JJH3 530 aa31.85■■■□□ 2.69
CDKN2A-201ENST00000304494 GH2P01242 217 aa31.85■■■□□ 2.69
CDKN2A-201ENST00000304494 MLLT1Q03111 559 aaPredicted RBP31.85■■■□□ 2.69
CDKN2A-201ENST00000304494 PSMC4P43686 418 aa31.84■■■□□ 2.69
CDKN2A-201ENST00000304494 SHROOM1Q2M3G4 852 aaPredicted RBP31.84■■■□□ 2.69
CDKN2A-201ENST00000304494 GLRX3O76003 335 aaKnown RBP31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 FMNL1O95466 1100 aaPredicted RBP31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 CHGBP05060 677 aa31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 ZFYP08048 801 aaPredicted RBP31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 OSBPP22059 807 aa31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 HOXD10P28358 340 aa31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 GABPAQ06546 454 aa31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 ABCB5Q2M3G0 1257 aa31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 LRRFIP1Q32MZ4 808 aaKnown RBP31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 AMOTL1Q8IY63 956 aa31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 CABP5Q9NP86 173 aa31.83■■■□□ 2.69
CDKN2A-201ENST00000304494 PRKAB2O43741 272 aa31.82■■■□□ 2.68
CDKN2A-201ENST00000304494 MX1P20591 662 aa31.82■■■□□ 2.68
CDKN2A-201ENST00000304494 SHMT1P34896 483 aa31.82■■■□□ 2.68
CDKN2A-201ENST00000304494 ANKRD45Q5TZF3 282 aa31.82■■■□□ 2.68
CDKN2A-201ENST00000304494 PUS7LQ9H0K6 701 aaKnown RBP31.82■■■□□ 2.68
CDKN2A-201ENST00000304494 PTCH2Q9Y6C5 1203 aa31.82■■■□□ 2.68
CDKN2A-201ENST00000304494 FCGRTP55899 365 aa31.81■■■□□ 2.68
CDKN2A-201ENST00000304494 PI4K2BQ8TCG2 481 aa31.81■■■□□ 2.68
CDKN2A-201ENST00000304494 ARMC5Q96C12 935 aa31.81■■■□□ 2.68
CDKN2A-201ENST00000304494 TRIM47Q96LD4 638 aa31.81■■■□□ 2.68
CDKN2A-201ENST00000304494 SWAP70Q9UH65 585 aa31.81■■■□□ 2.68
CDKN2A-201ENST00000304494 SLC4A4Q9Y6R1 1079 aa31.81■■■□□ 2.68
CDKN2A-201ENST00000304494 RAB3GAP1Q15042 981 aa31.8■■■□□ 2.68
CDKN2A-201ENST00000304494 SLC9C1Q4G0N8 1177 aa31.8■■■□□ 2.68
CDKN2A-201ENST00000304494 NBPF11Q86T75 865 aa31.8■■■□□ 2.68
CDKN2A-201ENST00000304494 RNF113AO15541 343 aaKnown RBP31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 ECM2O94769 699 aaPredicted RBP31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 CTGFP29279 349 aa31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 GCLCP48506 637 aaPredicted RBP31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 OTUD7AQ8TE49 926 aaPredicted RBP31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 APPBP2Q92624 585 aa31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 SRRDQ9UH36 339 aa31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 ZSWIM8A7E2V4 1837 aa31.79■■■□□ 2.68
CDKN2A-201ENST00000304494 CYP2D6P10635 497 aa31.78■■■□□ 2.68
CDKN2A-201ENST00000304494 USP17L2Q6R6M4 530 aa31.78■■■□□ 2.68
CDKN2A-201ENST00000304494 FEZ1Q99689 392 aa31.78■■■□□ 2.68
CDKN2A-201ENST00000304494 ASCC2Q9H1I8 757 aaPredicted RBP31.78■■■□□ 2.68
CDKN2A-201ENST00000304494 HOXA7P31268 230 aaPredicted RBP31.77■■■□□ 2.68
CDKN2A-201ENST00000304494 IRX3P78415 501 aaPredicted RBP31.77■■■□□ 2.68
CDKN2A-201ENST00000304494 FAM110CQ1W6H9 321 aa31.77■■■□□ 2.68
CDKN2A-201ENST00000304494 ANKRD13CQ8N6S4 541 aa31.77■■■□□ 2.68
CDKN2A-201ENST00000304494 RWDD1Q9H446 243 aaPredicted RBP31.77■■■□□ 2.68
CDKN2A-201ENST00000304494 CENPFP49454 3210 aa31.76■■■□□ 2.68
CDKN2A-201ENST00000304494 EVX2Q03828 476 aa31.76■■■□□ 2.67
CDKN2A-201ENST00000304494 STRBPQ96SI9 672 aaKnown RBP31.76■■■□□ 2.67
CDKN2A-201ENST00000304494 SALL3Q9BXA9 1300 aa31.75■■■□□ 2.67
CDKN2A-201ENST00000304494 USP17L12C9JPN9 530 aa31.75■■■□□ 2.67
CDKN2A-201ENST00000304494 USP17L21D6R901 530 aa31.75■■■□□ 2.67
CDKN2A-201ENST00000304494 USP14P54578 494 aa31.75■■■□□ 2.67
CDKN2A-201ENST00000304494 C12orf60Q5U649 245 aa31.75■■■□□ 2.67
CDKN2A-201ENST00000304494 OSBP2Q969R2 916 aa31.75■■■□□ 2.67
CDKN2A-201ENST00000304494 MYPNQ86TC9 1320 aa31.75■■■□□ 2.67
CDKN2A-201ENST00000304494 MPHOSPH10O00566 681 aaKnown RBP31.74■■■□□ 2.67
CDKN2A-201ENST00000304494 RAET1EQ8TD07 263 aa31.74■■■□□ 2.67
CDKN2A-201ENST00000304494 ZNF333Q96JL9 665 aa31.74■■■□□ 2.67
CDKN2A-201ENST00000304494 KIAA1683Q9H0B3 1180 aa31.74■■■□□ 2.67
CDKN2A-201ENST00000304494 EMILIN3Q9NT22 766 aa31.74■■■□□ 2.67
CDKN2A-201ENST00000304494 ARPP21Q9UBL0 812 aaPredicted RBP31.74■■■□□ 2.67
CDKN2A-201ENST00000304494 GIMAP6Q6P9H5 292 aa31.73■■■□□ 2.67
CDKN2A-201ENST00000304494 EXOC6Q8TAG9 804 aa31.73■■■□□ 2.67
CDKN2A-201ENST00000304494 C12orf42Q96LP6 360 aa31.73■■■□□ 2.67
CDKN2A-201ENST00000304494 FSD1Q9BTV5 496 aa31.73■■■□□ 2.67
CDKN2A-201ENST00000304494 GNAT2P19087 354 aa31.72■■■□□ 2.67
CDKN2A-201ENST00000304494 SEPT2Q15019 361 aa31.72■■■□□ 2.67
CDKN2A-201ENST00000304494 CTR9Q6PD62 1173 aa31.72■■■□□ 2.67
CDKN2A-201ENST00000304494 TMEM179Q6ZVK1 233 aa31.72■■■□□ 2.67
CDKN2A-201ENST00000304494 SLC44A5Q8NCS7 719 aa31.72■■■□□ 2.67
CDKN2A-201ENST00000304494 DYNLL2Q96FJ2 89 aa31.72■■■□□ 2.67
CDKN2A-201ENST00000304494 SUPT16HQ9Y5B9 1047 aaKnown RBP31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms