RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 SBK1Q52WX2 424 aa34.22■■■■□ 3.07
COPS6-201ENST00000303904 AFG3L2Q9Y4W6 797 aa34.22■■■■□ 3.07
COPS6-201ENST00000303904 LBX1P52954 281 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 CTR9Q6PD62 1173 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 FASTKD5Q7L8L6 764 aaKnown RBP34.21■■■■□ 3.07
COPS6-201ENST00000303904 BRI3BPQ8WY22 251 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 NAPBQ9H115 298 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 ZCCHC17Q9NP64 241 aaKnown RBP34.21■■■■□ 3.07
COPS6-201ENST00000303904 PRDM10Q9NQV6 1147 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 ZNF280CQ8ND82 737 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 ZNF287Q9HBT7 754 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 ZBTB21Q9ULJ3 1066 aa34.21■■■■□ 3.07
COPS6-201ENST00000303904 IGF2BP3O00425 579 aaKnown RBP eCLIP34.2■■■■□ 3.06
COPS6-201ENST00000303904 GDF11O95390 407 aa34.2■■■■□ 3.06
COPS6-201ENST00000303904 CYP2D6P10635 497 aa34.2■■■■□ 3.06
COPS6-201ENST00000303904 ABCB5Q2M3G0 1257 aa34.2■■■■□ 3.06
COPS6-201ENST00000303904 IFNL3Q8IZI9 196 aa34.2■■■■□ 3.06
COPS6-201ENST00000303904 CFHR5Q9BXR6 569 aa34.2■■■■□ 3.06
COPS6-201ENST00000303904 BAZ2AQ9UIF9 1905 aaKnown RBP34.19■■■■□ 3.06
COPS6-201ENST00000303904 NMIQ13287 307 aaPredicted RBP34.19■■■■□ 3.06
COPS6-201ENST00000303904 FAM227BQ96M60 508 aa34.19■■■■□ 3.06
COPS6-201ENST00000303904 TSKSQ9UJT2 592 aa34.19■■■■□ 3.06
COPS6-201ENST00000303904 TRIM75PA6NK02 468 aa34.18■■■■□ 3.06
COPS6-201ENST00000303904 MINDY4BA8MYZ0 360 aa34.18■■■■□ 3.06
COPS6-201ENST00000303904 SLC3A2P08195 630 aaKnown RBP34.18■■■■□ 3.06
COPS6-201ENST00000303904 SHMT1P34896 483 aa34.18■■■■□ 3.06
COPS6-201ENST00000303904 RRP1BQ14684 758 aaKnown RBP34.18■■■■□ 3.06
COPS6-201ENST00000303904 A0A0D9SFI3 127 aa34.17■■■■□ 3.06
COPS6-201ENST00000303904 GH2P01242 217 aa34.17■■■■□ 3.06
COPS6-201ENST00000303904 C16orf86Q6ZW13 317 aa34.17■■■■□ 3.06
COPS6-201ENST00000303904 CCDC17Q96LX7 622 aa34.17■■■■□ 3.06
COPS6-201ENST00000303904 PTPN18Q99952 460 aa34.17■■■■□ 3.06
COPS6-201ENST00000303904 ATAD5Q96QE3 1844 aa34.16■■■■□ 3.06
COPS6-201ENST00000303904 A0A0G2JLL6 359 aaPredicted RBP34.16■■■■□ 3.06
COPS6-201ENST00000303904 GSPT1P15170 499 aaKnown RBP34.16■■■■□ 3.06
COPS6-201ENST00000303904 SPP2Q13103 211 aa34.16■■■■□ 3.06
COPS6-201ENST00000303904 CCDC129Q6ZRS4 1044 aa34.16■■■■□ 3.06
COPS6-201ENST00000303904 PRRT2Q7Z6L0 340 aaPredicted RBP34.16■■■■□ 3.06
COPS6-201ENST00000303904 WDR18Q9BV38 432 aa34.16■■■■□ 3.06
COPS6-201ENST00000303904 EPB41L4AQ9HCS5 686 aaPredicted RBP34.16■■■■□ 3.06
COPS6-201ENST00000303904 CCDC171Q6TFL3 1326 aa34.15■■■■□ 3.06
COPS6-201ENST00000303904 MPHOSPH10O00566 681 aaKnown RBP34.15■■■■□ 3.06
COPS6-201ENST00000303904 ANKRD23Q86SG2 305 aa34.15■■■■□ 3.06
COPS6-201ENST00000303904 CYP2D7A0A087X1C5 515 aa34.14■■■■□ 3.06
COPS6-201ENST00000303904 TBC1D8O95759 1140 aa34.14■■■■□ 3.06
COPS6-201ENST00000303904 CDK8P49336 464 aa34.14■■■■□ 3.06
COPS6-201ENST00000303904 RAB3GAP1Q15042 981 aa34.14■■■■□ 3.06
COPS6-201ENST00000303904 CWC27Q6UX04 472 aaKnown RBP34.14■■■■□ 3.06
COPS6-201ENST00000303904 DYNLL2Q96FJ2 89 aa34.14■■■■□ 3.06
COPS6-201ENST00000303904 ZFYVE28Q9HCC9 887 aa34.14■■■■□ 3.06
COPS6-201ENST00000303904 TAF1CQ15572 869 aaPredicted RBP34.13■■■■□ 3.05
COPS6-201ENST00000303904 NOM1Q5C9Z4 860 aaKnown RBP34.13■■■■□ 3.05
COPS6-201ENST00000303904 MKNK2Q9HBH9 465 aa34.13■■■■□ 3.05
COPS6-201ENST00000303904 PPP4R2Q9NY27 417 aa34.13■■■■□ 3.05
COPS6-201ENST00000303904 FRMD4AQ9P2Q2 1039 aaPredicted RBP34.13■■■■□ 3.05
COPS6-201ENST00000303904 BTBD19C9JJ37 291 aa34.13■■■■□ 3.05
COPS6-201ENST00000303904 GADL1Q6ZQY3 521 aa34.13■■■■□ 3.05
COPS6-201ENST00000303904 CCDC84Q86UT8 332 aaPredicted RBP34.13■■■■□ 3.05
COPS6-201ENST00000303904 FAM43AQ8N2R8 423 aa34.13■■■■□ 3.05
COPS6-201ENST00000303904 RUFY2Q8WXA3 655 aa34.13■■■■□ 3.05
COPS6-201ENST00000303904 C19orf81C9J6K1 198 aa34.12■■■■□ 3.05
COPS6-201ENST00000303904 TMEM179Q6ZVK1 233 aa34.12■■■■□ 3.05
COPS6-201ENST00000303904 PROCA1Q8NCQ7 364 aaPredicted RBP34.12■■■■□ 3.05
COPS6-201ENST00000303904 SLC44A5Q8NCS7 719 aa34.12■■■■□ 3.05
COPS6-201ENST00000303904 TMOD4Q9NZQ9 345 aa34.12■■■■□ 3.05
COPS6-201ENST00000303904 ROBO3Q96MS0 1386 aa34.12■■■■□ 3.05
COPS6-201ENST00000303904 USP17L10C9JJH3 530 aa34.11■■■■□ 3.05
COPS6-201ENST00000303904 BACE1P56817 501 aa34.11■■■■□ 3.05
COPS6-201ENST00000303904 PDE4BQ07343 736 aa34.11■■■■□ 3.05
COPS6-201ENST00000303904 EVX2Q03828 476 aa34.1■■■■□ 3.05
COPS6-201ENST00000303904 PABPC4Q13310 644 aaKnown RBP eCLIP34.1■■■■□ 3.054e-7■■□□□ 13.5
COPS6-201ENST00000303904 FEZ1Q99689 392 aa34.1■■■■□ 3.05
COPS6-201ENST00000303904 PDHXO00330 501 aa34.09■■■■□ 3.05
COPS6-201ENST00000303904 CRHR2Q13324 411 aa34.09■■■■□ 3.05
COPS6-201ENST00000303904 ALX1Q15699 326 aa34.09■■■■□ 3.05
COPS6-201ENST00000303904 SLC45A1Q9Y2W3 748 aa34.09■■■■□ 3.05
COPS6-201ENST00000303904 GPR25O00155 361 aa34.08■■■■□ 3.05
COPS6-201ENST00000303904 JAG1P78504 1218 aa34.08■■■■□ 3.05
COPS6-201ENST00000303904 PPARAQ07869 468 aa34.08■■■■□ 3.05
COPS6-201ENST00000303904 ZNF589Q86UQ0 364 aaPredicted RBP34.08■■■■□ 3.05
COPS6-201ENST00000303904 PARK7Q99497 189 aaKnown RBP34.08■■■■□ 3.05
COPS6-201ENST00000303904 PHIPQ8WWQ0 1821 aa34.08■■■■□ 3.05
COPS6-201ENST00000303904 HSPD1P10809 573 aaKnown RBP34.07■■■■□ 3.04
COPS6-201ENST00000303904 HMGCS2P54868 508 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 MTMR2Q13614 643 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 SH3D19Q5HYK7 790 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 VPS53Q5VIR6 699 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 PNMA3Q9UL41 463 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 AGTPBP1Q9UPW5 1226 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 MYH8P13535 1937 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 ZMYM6O95789 1325 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 RAD50Q92878 1312 aa34.07■■■■□ 3.04
COPS6-201ENST00000303904 USP14P54578 494 aa34.06■■■■□ 3.04
COPS6-201ENST00000303904 ZNF444Q8N0Y2 327 aaPredicted RBP34.06■■■■□ 3.04
COPS6-201ENST00000303904 MOGSQ13724 837 aa34.05■■■■□ 3.04
COPS6-201ENST00000303904 SHROOM1Q2M3G4 852 aaPredicted RBP34.05■■■■□ 3.04
COPS6-201ENST00000303904 SH2D4AQ9H788 454 aa34.05■■■■□ 3.04
COPS6-201ENST00000303904 SEPT2Q15019 361 aa34.04■■■■□ 3.04
COPS6-201ENST00000303904 FKTNO75072 461 aa34.04■■■■□ 3.04
COPS6-201ENST00000303904 USP17L2Q6R6M4 530 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms