RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SYCE3A1L190 88 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 YEATS4O95619 227 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 CHRNA5P30532 468 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 FOSBP53539 338 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 KRT40Q6A162 431 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 C16orf86Q6ZW13 317 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 MKNK2Q9HBH9 465 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 TTF2Q9UNY4 1162 aaKnown RBP12.3□□□□□ -0.44
CLP1-201ENST00000302731 ECM29Q5VYK3 1845 aa12.3□□□□□ -0.44
CLP1-201ENST00000302731 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
CLP1-201ENST00000302731 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLP1-201ENST00000302731 NASPP49321 788 aaPredicted RBP12.29□□□□□ -0.44
CLP1-201ENST00000302731 TFAP4Q01664 338 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 FUT2Q10981 343 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 ZNF444Q8N0Y2 327 aaPredicted RBP12.29□□□□□ -0.44
CLP1-201ENST00000302731 DDX19AQ9NUU7 478 aaKnown RBP12.29□□□□□ -0.44
CLP1-201ENST00000302731 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 PLCD1P51178 756 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 EVX2Q03828 476 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 FAM47AQ5JRC9 791 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 OTUD7BQ6GQQ9 843 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 RCSD1Q6JBY9 416 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 CTCFLQ8NI51 663 aaPredicted RBP12.29□□□□□ -0.44
CLP1-201ENST00000302731 KCNG4Q8TDN1 519 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 TEKT1Q969V4 418 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 PGBD1Q96JS3 809 aa12.29□□□□□ -0.44
CLP1-201ENST00000302731 MYH1P12882 1939 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 ECE2O60344 883 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 MMP1P03956 469 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 XBP1P17861 261 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 KIF5BP33176 963 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 AKAP17AQ02040 695 aaKnown RBP12.28□□□□□ -0.44
CLP1-201ENST00000302731 SAFBQ15424 915 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLP1-201ENST00000302731 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 TTLL6Q8N841 843 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 LINC00301Q8NCQ3 95 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 FBXW7Q969H0 707 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 ZDHHC15Q96MV8 337 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 AIFM3Q96NN9 605 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 VPS33BQ9H267 617 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 IL17RBQ9NRM6 502 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
CLP1-201ENST00000302731 KIF13BQ9NQT8 1826 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 USP17L3A6NCW0 530 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 USP17L4A6NCW7 530 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 KIF28PB7ZC32 967 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.44
CLP1-201ENST00000302731 WDHD1O75717 1129 aaPredicted RBP12.27□□□□□ -0.44
CLP1-201ENST00000302731 RASA1P20936 1047 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 CDK8P49336 464 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 USP17L1Q7RTZ2 530 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 FOXP1Q9H334 677 aaPredicted RBP12.27□□□□□ -0.44
CLP1-201ENST00000302731 TSPY26PQ9H489 355 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 KAT14Q9H8E8 782 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 DBNDD1Q9H9R9 158 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 GJB4Q9NTQ9 266 aa12.27□□□□□ -0.44
CLP1-201ENST00000302731 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.45
CLP1-201ENST00000302731 PLIN4Q96Q06 1357 aa12.27□□□□□ -0.45
CLP1-201ENST00000302731 A0A1W2PQ27 194 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 A0A1W2PQ64 194 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 A0A1W2PQD8 194 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 NMT2O60551 498 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 GUCY1A2P33402 732 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 NOVP48745 357 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 GNAQP50148 359 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 GABPAQ06546 454 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 GNL2Q13823 731 aaKnown RBP12.26□□□□□ -0.45
CLP1-201ENST00000302731 CCDC93Q567U6 631 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 ADALQ6DHV7 355 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 APOBEC3HQ6NTF7 200 aaKnown RBP12.26□□□□□ -0.45
CLP1-201ENST00000302731 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 PSMD1Q99460 953 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLP1-201ENST00000302731 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 SWAP70Q9UH65 585 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 SAP30BPQ9UHR5 308 aaKnown RBP12.26□□□□□ -0.45
CLP1-201ENST00000302731 LIG1P18858 919 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 CRKP46108 304 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 STK38Q15208 465 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 PKN1Q16512 942 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 SOGA3Q5TF21 947 aa12.26□□□□□ -0.45
CLP1-201ENST00000302731 RBM43Q6ZSC3 357 aaKnown RBP12.26□□□□□ -0.45
CLP1-201ENST00000302731 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
CLP1-201ENST00000302731 PDGFDQ9GZP0 370 aaPredicted RBP12.26□□□□□ -0.45
CLP1-201ENST00000302731 USP40Q9NVE5 1235 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms