RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 CCDC17Q96LX7 622 aa23.78■■□□□ 1.4
SCAMP3-201ENST00000302631 SNCAIPQ9Y6H5 919 aa23.78■■□□□ 1.4
SCAMP3-201ENST00000302631 HSPA4P34932 840 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 NT5C2P49902 561 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 JAG1P78504 1218 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 VGLL4Q14135 290 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 TSGA10IPQ3SY00 556 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 CREB3L3Q68CJ9 461 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 SCYL3Q8IZE3 742 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 RNF41Q9H4P4 317 aaPredicted RBP23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 INCENPQ9NQS7 918 aa23.77■■□□□ 1.4
SCAMP3-201ENST00000302631 HUNKP57058 714 aa23.76■■□□□ 1.39
SCAMP3-201ENST00000302631 MKNK2Q9HBH9 465 aa23.76■■□□□ 1.39
SCAMP3-201ENST00000302631 TAF6LQ9Y6J9 622 aa23.76■■□□□ 1.39
SCAMP3-201ENST00000302631 MFSD6Q6ZSS7 791 aa23.76■■□□□ 1.39
SCAMP3-201ENST00000302631 CLMNQ96JQ2 1002 aa23.76■■□□□ 1.39
SCAMP3-201ENST00000302631 RASSF10A6NK89 507 aa23.75■■□□□ 1.39
SCAMP3-201ENST00000302631 PRDM1O75626 825 aa23.75■■□□□ 1.39
SCAMP3-201ENST00000302631 GUCY1A2P33402 732 aa23.75■■□□□ 1.39
SCAMP3-201ENST00000302631 STK11IPQ8N1F8 1099 aa23.75■■□□□ 1.39
SCAMP3-201ENST00000302631 ZBTB21Q9ULJ3 1066 aa23.75■■□□□ 1.39
SCAMP3-201ENST00000302631 CSADQ9Y600 493 aa23.75■■□□□ 1.39
SCAMP3-201ENST00000302631 PLIN4Q96Q06 1357 aa23.75■■□□□ 1.39
SCAMP3-201ENST00000302631 GDF11O95390 407 aa23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 ASNSP08243 561 aa23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 AKR1B1P15121 316 aa23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 HSPA6P17066 643 aa23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 ABCB5Q2M3G0 1257 aa23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 RNF20Q5VTR2 975 aa23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 ZNF444Q8N0Y2 327 aaPredicted RBP23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.74■■□□□ 1.39
SCAMP3-201ENST00000302631 E7EWF7 191 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 PTPRAP18433 802 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 NEDD4P46934 1319 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 SHROOM1Q2M3G4 852 aaPredicted RBP23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 RGMBQ6NW40 437 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 STOX1Q6ZVD7 989 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 RASEFQ8IZ41 740 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 NEDD1Q8NHV4 660 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 NKX2-3Q8TAU0 364 aa23.73■■□□□ 1.39
SCAMP3-201ENST00000302631 IGKV6D-41A0A0C4DH26 115 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 SPDYE5A6NIY4 337 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 GH2P01242 217 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 TMEM179Q6ZVK1 233 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 ERO1BQ86YB8 467 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 SLC10A4Q96EP9 437 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 BACH2Q9BYV9 841 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 CNNM2Q9H8M5 875 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 CABP5Q9NP86 173 aa23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 ABT1Q9ULW3 272 aaKnown RBP23.72■■□□□ 1.39
SCAMP3-201ENST00000302631 PPATQ06203 517 aa23.71■■□□□ 1.39
SCAMP3-201ENST00000302631 TBC1D2Q9BYX2 928 aa23.71■■□□□ 1.39
SCAMP3-201ENST00000302631 KRT23Q9C075 422 aa23.71■■□□□ 1.39
SCAMP3-201ENST00000302631 ELP3Q9H9T3 547 aa23.71■■□□□ 1.39
SCAMP3-201ENST00000302631 IL17RAQ96F46 866 aa23.7■■□□□ 1.38
SCAMP3-201ENST00000302631 PICK1Q9NRD5 415 aa23.7■■□□□ 1.38
SCAMP3-201ENST00000302631 TCP11L1Q9NUJ3 509 aa23.7■■□□□ 1.38
SCAMP3-201ENST00000302631 PTPRFP10586 1907 aa23.7■■□□□ 1.38
SCAMP3-201ENST00000302631 USP17L5A8MUK1 530 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 FAM155AB1AL88 458 aaPredicted RBP23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 NOVP48745 357 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 TFAP4Q01664 338 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 DEFB115Q30KQ5 88 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 RASAL3Q86YV0 1011 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 ESR2Q92731 530 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 WDR18Q9BV38 432 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 SNX14Q9Y5W7 946 aa23.69■■□□□ 1.38
SCAMP3-201ENST00000302631 SLC10A3P09131 477 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 ZKSCAN1P17029 563 aaPredicted RBP23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 GJA5P36382 358 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 SEPT2Q15019 361 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 FAM47AQ5JRC9 791 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 SIAH1Q8IUQ4 282 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 NCOA7Q8NI08 942 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 OPTNQ96CV9 577 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 WNK4Q96J92 1243 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 ZSWIM5Q9P217 1185 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 AFG3L2Q9Y4W6 797 aa23.68■■□□□ 1.38
SCAMP3-201ENST00000302631 B4E1Z4 1266 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 RANBP6O60518 1105 aaKnown RBP23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 TSPY3P0CV98 308 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 TSPY8P0CW00 308 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 ZBTB48P10074 688 aaPredicted RBP23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 ZNF157P51786 506 aaPredicted RBP23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 PPIL2Q13356 520 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 SPRYD7Q5W111 196 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 MB21D2Q8IYB1 491 aaPredicted RBP23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 CNKSR2Q8WXI2 1034 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 CCDC102AQ96A19 550 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 KANSL2Q9H9L4 492 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 IL17RBQ9NRM6 502 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 KCNH4Q9UQ05 1017 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 TSPY2A6NKD2 308 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 MCCP23508 829 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 TRDNQ13061 729 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 KRT32Q14532 448 aa23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 RRP12Q5JTH9 1297 aaKnown RBP23.67■■□□□ 1.38
SCAMP3-201ENST00000302631 TOMM22Q9NS69 142 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms